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    29 repositories

    • BrepPhylo

      Public
      phylogenetic reconstruction of BCR lineages
      HTML
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Dec 31, 2024Dec 31, 2024

    • POPScomp

      Public
      Solvent Accessible Surface Areas of Biomolecules and their Complexes
      structurednaproteincomplexrnasolvationbiomoleculesolvent-accessible-surface-area
      C
      •
      GNU General Public License v3.0
      •4•15•2•0•Updated Dec 27, 2024Dec 27, 2024

    • AlloHubPy

      Public
      Python version for the AllohubMat analysis
      HTML
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Dec 23, 2024Dec 23, 2024

    • BrepConvert

      Public
      Analyse gene conversion events in immunoglobulin sequences
      R
      •
      GNU General Public License v3.0
      •0•2•1•0•Updated Nov 21, 2024Nov 21, 2024

    • IL1-InhibitorsScreening

      Public
      0•0•0•0•Updated Sep 26, 2024Sep 26, 2024

    • VCAb

      Public
      V and C region bearing antibody database
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •2•5•0•0•Updated Sep 25, 2024Sep 25, 2024

    • Fraternalilab.github.io

      Public
      Fraternali Lab
      HTML
      •
      MIT License
      •0•0•0•2•Updated Sep 15, 2024Sep 15, 2024

    • sciCSR

      Public
      Single-Cell Inference of Class Switch Recombination
      R
      •
      GNU General Public License v3.0
      •3•18•3•0•Updated Aug 5, 2024Aug 5, 2024

    • ANARCI_vc

      Public
      Antibody Numbering for both v and c region
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •93•0•0•0•Updated Apr 2, 2024Apr 2, 2024

    • TrajSAencode

      Public
      Python version of the SA encoding method
      C
      •1•0•0•0•Updated Mar 22, 2024Mar 22, 2024

    • sciCSR-analysis

      Public
      analysis scripts in the Ng et al. sciCSR paper
      Shell
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 8, 2023Jun 8, 2023

    • HOIP-ensembles-Kausas-et-al

      Public
      Supplementary data and code for "Characterisation of HOIP RBR E3 ligase conformational dynamics using integrative modelling".
      Jupyter Notebook
      •0•0•0•0•Updated Sep 5, 2022Sep 5, 2022

    • 5BBB0226_Protein_Modelling_Tutorial

      Public
      0•0•0•0•Updated Mar 16, 2022Mar 16, 2022

    • BrepPhyloAnalysis

      Public
      Analysis for the BrepPhylo paper on COVID, Ebola and RSV repertoires
      HTML
      •0•0•0•0•Updated Feb 8, 2022Feb 8, 2022

    • scRNAVeloQuant

      Public
      MIT License
      •0•0•0•0•Updated May 11, 2021May 11, 2021

    • TW-Materials

      Public
      Python
      •0•0•0•0•Updated May 7, 2021May 7, 2021

    • PDBencode

      Public
      Encodes PDB structures into Structural Alphabet sequences
      R
      •
      Other
      •0•1•0•0•Updated Mar 26, 2021Mar 26, 2021

    • DCDencode

      Public
      Encode DCD trajectory into Structural Alphabet sequences
      R
      •
      Other
      •0•0•0•0•Updated Mar 14, 2021Mar 14, 2021

    • obscurinDB

      Public
      Database of obscurin single amino-acid variants and mapping to sequence and structural information
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 26, 2020Jun 26, 2020

    • POPSCOMPlegacy

      Public
      Analysis of biomolecular complex interfaces
      Perl
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Feb 23, 2020Feb 23, 2020

    • POPSlegacy

      Public
      POPS*: solvent accessible surface areas (SASAs) of proteins and nucleic acids
      C
      •
      GNU General Public License v3.0
      •2•2•0•0•Updated Feb 23, 2020Feb 23, 2020

    • PIFS

      Public
      Protein Interface Fingerprinting with Subgraphs
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 16, 2019Dec 16, 2019

    • Hackathon_Summer2019

      Public
      Code challenges for summer students
      Python
      •0•0•0•0•Updated Jul 18, 2019Jul 18, 2019

    • ALLOHUBMAT

      Public
      Detection of Allosteric Hub Residues
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Jul 10, 2019Jul 10, 2019

    • RESPECTEx

      Public
      Reconstituting Specific Cell-type Expression
      R
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Jan 14, 2019Jan 14, 2019

    • allosterome

      Public
      Allosterome project
      R
      •0•0•0•0•Updated Dec 13, 2017Dec 13, 2017

    • CompAllo

      Public
      Open source material of CECAM workshop CompAllo, 09-11.04.2018 in Lausanne
      0•0•0•0•Updated Oct 1, 2017Oct 1, 2017

    • netfeat

      Public
      analysis of network features
      C
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Feb 28, 2017Feb 28, 2017

    • GA

      Public
      Genetic Algorithm
      C
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 26, 2017Jan 26, 2017