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    9 repositories

    • cellshape

      Public
      3D shape analysis using deep learning
      cell-biologygeometric-deep-learningcancer-biologydeep-learning
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •6•21•4•0•Updated Oct 19, 2023Oct 19, 2023

    • cellshape-cloud

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •3•5•4•0•Updated Aug 21, 2023Aug 21, 2023

    • cellshape-cluster

      Public
      Cellshape-cluster is an easy-to-use tool to analyse the cluster cells by their shape using deep learning and, in particular, deep-embedded-clustering
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•4•1•0•Updated Apr 27, 2023Apr 27, 2023

    • cellshape-collection

      Public
      Code for the data collection and segmentation of 3D single cells
      MATLAB
      •1•0•0•0•Updated Feb 24, 2023Feb 24, 2023

    • cellshape-voxel

      Public
      Cellshape-voxel is an easy-to-use tool to analyse the shapes of cells using deep learning and, in particular, 3D convolutional neural networks.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•5•0•0•Updated Feb 24, 2023Feb 24, 2023

    • cellshape-helper

      Public
      Cellshape-helper provides the ability to convert 3D masks to point clouds.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •3•2•2•0•Updated Feb 23, 2023Feb 23, 2023

    • .github

      Public
      0•0•0•0•Updated Oct 1, 2022Oct 1, 2022

    • cellshape-generate

      Public
      Generational models for analysing 3D cell and nuclei shape.
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Sep 27, 2022Sep 27, 2022

    • PyMesh

      Public
      Geometry Processing Library for Python
      C++
      •362•0•0•0•Updated May 12, 2022May 12, 2022