ARAMIS Lab

All

35 repositories

clinica
Public
Software platform for clinical neuroimaging studies
scikit-learn spm fsl ants freesurfer bids-format mrtrix3 brainweb python machine-learning
Python
•
Other
•77•225•68•12•Updated Nov 12, 2024Nov 12, 2024
clinicadl
Public
Framework for the reproducible processing of neuroimaging data with deep learning methods
medical-imaging neuroimaging convolutional-neural-network brain-imaging alzheimer-disease python deep-learning pytorch
Python
•
MIT License
•55•162•18•13•Updated Nov 12, 2024Nov 12, 2024
miccai2022-stratifiad
Public
Python
•
MIT License
•1•3•1•0•Updated Sep 3, 2024Sep 3, 2024
MOOD_2024_public
Public
Python
•0•0•0•0•Updated Aug 23, 2024Aug 23, 2024
clinicadl_handbook
Public
Tutorial to use (new version of) clinicadl (>1.0.3)
learning deep neuroimaging
Jupyter Notebook
•
Creative Commons Zero v1.0 Universal
•6•0•5•1•Updated Jun 4, 2024Jun 4, 2024
clinica-pydra-petpvc
Public
Pydra tasks for PETPVC designed for Clinica
neuroimaging partial-volume-correction positron-emission-tomography pydra
Python
•
Apache License 2.0
•0•0•0•0•Updated Apr 30, 2024Apr 30, 2024
clinica-pydra-freesurfer
Public
Pydra tasks for FreeSurfer designed for Clinica
neuroimaging freesurfer pydra
Python
•
Apache License 2.0
•1•5•0•0•Updated Apr 30, 2024Apr 30, 2024
clinica-pydra-fsl
Public
Pydra tasks for FSL designed for Clinica
neuroimaging fsl pydra
Python
•
Apache License 2.0
•1•3•0•0•Updated Apr 30, 2024Apr 30, 2024
clinica-pydra-ants
Public
Pydra tasks for ANTs designed for Clinica
neuroimaging ants pydra
Python
•
Apache License 2.0
•0•0•0•0•Updated Apr 26, 2024Apr 26, 2024
pydra-spm
Public archive
Pydra tasks for SPM
python neuroimaging spm pydra
Python
•
Apache License 2.0
•1•0•0•0•Updated Apr 2, 2024Apr 2, 2024
pydra-bids
Public archive
Pydra tasks for BIDS I/O
neuroimaging bids pydra
Python
•
Apache License 2.0
•1•2•0•1•Updated Apr 2, 2024Apr 2, 2024
pydra-dcm2bids
Public archive
Pydra tasks for dcm2bids
dicom bids pydra
Python
•
Apache License 2.0
•0•1•0•0•Updated Apr 1, 2024Apr 1, 2024
pydra-brainstat
Public
Pydra tasks for BrainStat
neuroimaging pydra
Python
•
Apache License 2.0
•0•0•0•0•Updated Apr 1, 2024Apr 1, 2024
dataset-registry
Public
Public dataset registry for dvc
0•0•0•0•Updated Nov 29, 2023Nov 29, 2023
NOW-2023
Public
Repository for the 2023 NeuroScience Open Workshop
Jupyter Notebook
•
MIT License
•1•1•0•0•Updated Nov 24, 2023Nov 24, 2023
NOW-2023-lib
Public
Library to be used for NOW 2023 workshop
Python
•
MIT License
•0•0•0•0•Updated Nov 20, 2023Nov 20, 2023
clinicadl-pythae
Public
Python
•1•0•0•0•Updated Oct 5, 2023Oct 5, 2023
pydra-tasks-ants
Public archive
Pydra tasks for ANTs
Python
•
Apache License 2.0
•0•0•0•1•Updated Sep 11, 2023Sep 11, 2023
RSECon23-Pydra
Public
Jupyter Notebook
•
Creative Commons Attribution Share Alike 4.0 International
•0•0•0•0•Updated Sep 6, 2023Sep 6, 2023
clinicadl_bis
Public
Framework for the reproducible processing of neuroimaging data with deep learning methods
Python
•
MIT License
•55•0•0•0•Updated Feb 16, 2023Feb 16, 2023
handbook
Public
The Aramis Lab Handbook
Makefile
•
Creative Commons Attribution Share Alike 4.0 International
•3•0•0•0•Updated Dec 12, 2022Dec 12, 2022
idhm2022-pydra-demo
Public
Jupyter Notebook
•
BSD 3-Clause "New" or "Revised" License
•1•0•0•0•Updated Dec 9, 2022Dec 9, 2022
idhm2022-bids-primer
Public
talk bids
Creative Commons Attribution 4.0 International
•1•0•0•0•Updated Dec 7, 2022Dec 7, 2022
AD-ML
Public
Framework for the reproducible classification of Alzheimer's disease using machine learning
python machine-learning scikit-learn neuroimaging alzheimer-disease
Python
•
MIT License
•15•40•0•1•Updated May 31, 2022May 31, 2022
MICCAI-educational-challenge-2020
Public
AD Classification using Clinica
MIT License
•2•4•1•0•Updated Feb 17, 2022Feb 17, 2022
Notebooks-AD-DL
Public
Notebooks for classification of Alzheimer's disease using deep learning
Jupyter Notebook
•
MIT License
•2•7•3•0•Updated Feb 16, 2022Feb 16, 2022
DL4MI
Public
Workshop Deep Learning for Medical Imaging
deep-learning medical-imaging
Jupyter Notebook
•
Creative Commons Zero v1.0 Universal
•8•7•0•0•Updated Jan 20, 2022Jan 20, 2022
axial-mlp
Public
Implementation of Axial-MLP in PyTorch
Python
•1•3•0•0•Updated Nov 21, 2021Nov 21, 2021
AD-DL
Public archive
Classification of Alzheimer's disease status with convolutional neural networks.
deep-learning convolutional-neural-networks alzheimers-disease
Python
•
MIT License
•10•56•0•0•Updated Jul 22, 2021Jul 22, 2021
hiplay7-thickness
Public
MATLAB
•
Other
•0•1•0•0•Updated Jun 10, 2020Jun 10, 2020