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    18 repositories

    • flash-paint-analysis

      Public
      Repository for analysis performed in "Unraveling cellular complexity with unlimited multiplexed superresolution imaging".
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Feb 6, 2024Feb 6, 2024

    • Rtn4_paper_code

      Public
      Scripts used in the Rtn4 paper for all the various anlyses.
      Jupyter Notebook
      •0•0•0•0•Updated Jul 7, 2023Jul 7, 2023

    • Lukas-NanoWrap-Scripts

      Public
      scripts used to make figures in NanoWrap paper
      Jupyter Notebook
      •0•0•0•0•Updated Jul 5, 2023Jul 5, 2023

    • Yifei-Lukas-Collab

      Public
      Repository for image analysis scripts for the collaboration between Lukas and Yifei
      Jupyter Notebook
      •0•0•0•0•Updated Jun 29, 2023Jun 29, 2023

    • nep-fitting

      Public
      Python
      •1•3•1•0•Updated Jun 26, 2023Jun 26, 2023

    • Tampe-Collab

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jun 21, 2023Jun 21, 2023

    • pyme-psf-extraction

      Public
      PYME module for PSF extraction
      Python
      •3•3•0•0•Updated Oct 14, 2022Oct 14, 2022

    • cross-correlation-drift-correction

      Public
      PYME module for cross correlation-based drift correction with support for both image and localization data.
      Python
      •6•1•0•0•Updated Aug 10, 2022Aug 10, 2022

    • fluorogenic-dna-paint-manuscript-supplement

      Public
      Jupyter Notebook
      •2•0•0•0•Updated Sep 19, 2021Sep 19, 2021

    • isoSTED

      Public
      isoSTED source code
      LabVIEW
      •
      Apache License 2.0
      •2•7•0•0•Updated Apr 8, 2021Apr 8, 2021

    • pyme-twitter

      Public
      auto tweeting from Scopey McScopeFace
      Python
      •
      BSD 2-Clause "Simplified" License
      •0•0•0•0•Updated Dec 31, 2020Dec 31, 2020

    • quant-condensate

      Public
      Clustering quantification for Courchaine et al 2020
      Jupyter Notebook
      •
      BSD 2-Clause "Simplified" License
      •0•0•0•0•Updated Dec 9, 2020Dec 9, 2020

    • pyme-fsc

      Public
      Python
      •1•0•0•0•Updated Dec 7, 2020Dec 7, 2020

    • dmlib

      Public
      Deformable mirror calibration and control library
      Python
      •
      Other
      •10•0•0•0•Updated Sep 4, 2020Sep 4, 2020

    • devwraps

      Public
      A collection of device wrappers for Python 3 in Windows
      Python
      •
      Other
      •6•0•0•0•Updated Sep 3, 2020Sep 3, 2020

    • salvaged-fluorescence

      Public
      Matlab codes for salvaged fluorescence ratiometric approach
      MATLAB
      •1•1•0•0•Updated Oct 1, 2019Oct 1, 2019

    • HDBScan

      Public
      Uses the conda HDBScan module for an alternative to regular dbscan clustering
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated May 9, 2019May 9, 2019

    • fiber-shaker

      Public
      C++
      •0•0•0•0•Updated Apr 13, 2018Apr 13, 2018