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@ersilia-os Ersilia Open Source Initiative

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    265 repositories

    • ersilia

      Public
      The Ersilia Model Hub, a repository of AI/ML models for infectious and neglected disease research.
      open-sourcedrug-discoveryneglected-tropical-diseaseersiliamodel-hubpythonmachine-learning
      Python
      •
      GNU General Public License v3.0
      •145•210•40•12•Updated Oct 14, 2024Oct 14, 2024

    • stylia

      Public
      Decent scientific plot styles
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•2•0•0•Updated Oct 10, 2024Oct 10, 2024

    • ersilia-client

      Public
      Simple client to the Ersilia Model Hub for containerized models
      Python
      •
      GNU General Public License v3.0
      •3•0•0•0•Updated Oct 10, 2024Oct 10, 2024

    • ersilia-pack

      Public
      Module to pack Ersilia models with FastAPI
      Python
      •
      GNU General Public License v3.0
      •6•1•9•2•Updated Oct 10, 2024Oct 10, 2024

    • ersilia-assistant

      Public
      A chat assistant to help you design experimental workflows with Ersilia models with ease!
      Python
      •
      GNU General Public License v3.0
      •0•0•3•0•Updated Oct 7, 2024Oct 7, 2024

    • sars-cov-2-chemspace

      Public
      This repository explores the chemical space associated with SARS-CoV-2 according to manually curated data at UB-CeDD
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•1•0•Updated Oct 3, 2024Oct 3, 2024

    • ai2050-dd-workshop

      Public
      AI/ML tools for drug discovery workshop workshop held in Ghana, September 2024
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Oct 3, 2024Oct 3, 2024

    • pharmacogx-embeddings

      Public
      Pharmacogenomics knowledge graph embeddings and related analyses
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•3•5•0•Updated Oct 3, 2024Oct 3, 2024

    • pharmacogx-arsa

      Public
      Look for abundant region specific alleles for pharmacogenomics
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Sep 30, 2024Sep 30, 2024

    • eos9ei3

      Public
      Estimation of synthetic accessibility score of drug-like molecules based on molecular complexity and fragment contributions
      Python
      •
      GNU General Public License v3.0
      •1•2•0•1•Updated Sep 29, 2024Sep 29, 2024

    • eos-template

      Public template
      Template repository to add new models to the Ersilia Model Hub
      template
      Python
      •
      GNU General Public License v3.0
      •1•1•5•0•Updated Sep 29, 2024Sep 29, 2024

    • eos-demo

      Public
      Demo repository for the Ersilia Model Hub
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Sep 29, 2024Sep 29, 2024

    • eos80ch

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•1•0•Updated Sep 29, 2024Sep 29, 2024

    • eos3nn9

      Public
      Python
      •
      GNU General Public License v3.0
      •2•0•1•0•Updated Sep 29, 2024Sep 29, 2024

    • eos3b5e

      Public
      Molecular weight calculation
      Python
      •
      GNU General Public License v3.0
      •7•0•1•0•Updated Sep 29, 2024Sep 29, 2024

    • model-inference-pipeline

      Public
      Ersilia's batch inference pipeline on the AWS cloud
      Jupyter Notebook
      •
      MIT License
      •0•2•11•1•Updated Sep 29, 2024Sep 29, 2024

    • eos39dp

      Public
      Python
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated Sep 26, 2024Sep 26, 2024

    • ersilia-self-service

      Public
      GNU General Public License v3.0
      •1•1•29•0•Updated Sep 24, 2024Sep 24, 2024

    • eos5gge

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 23, 2024Sep 23, 2024

    • eos3wzy

      Public
      Fortran
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated Sep 23, 2024Sep 23, 2024

    • eos7d58

      Public
      Python
      •
      GNU General Public License v3.0
      •1•0•2•0•Updated Sep 22, 2024Sep 22, 2024

    • eos7a04

      Public
      Continuous and data driven descriptors
      Python
      •
      GNU General Public License v3.0
      •2•1•2•0•Updated Sep 22, 2024Sep 22, 2024

    • eos8aox

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•2•0•Updated Sep 20, 2024Sep 20, 2024

    • eos4e40

      Public
      Predictor of antibiotic activity for small molecules
      Python
      •
      GNU General Public License v3.0
      •4•0•0•0•Updated Sep 20, 2024Sep 20, 2024

    • eos2b6f

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Sep 19, 2024Sep 19, 2024

    • eos44zp

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 19, 2024Sep 19, 2024

    • ersilia-figures

      Public
      Images and figures used by Ersilia in the website, social media and presentations
      Jupyter Notebook
      •0•1•0•0•Updated Sep 7, 2024Sep 7, 2024

    • eos1d7r

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 7, 2024Sep 7, 2024

    • eos5xng

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•2•0•Updated Sep 7, 2024Sep 7, 2024

    • eos9yui

      Public
      Natural product likeness score
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 5, 2024Sep 5, 2024