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    50 repositories

    • guacamole

      Public
      example repository for Introduction to Git and GitHub
      githubgittraining
      50•0•8•6•Updated Feb 28, 2023Feb 28, 2023

    • .github

      Public
      0•0•0•0•Updated Oct 11, 2022Oct 11, 2022

    • fredhutch.io

      Public
      computational training at Fred Hutch
      HTML
      •
      Other
      •4k•12•6•0•Updated Jun 11, 2021Jun 11, 2021

    • git_github_intro

      Public
      three class intro to git: git workflow in desktop app, GitHub, command line git
      githubgittraining
      Other
      •10•7•9•0•Updated May 5, 2021May 5, 2021

    • practice-machine-learning

      Public
      suggestions to practice machine learning for biomedical applications
      trainingdata-sciencedata-analysisbiomedical-researchmachine-learning
      0•3•2•0•Updated May 4, 2021May 4, 2021

    • python_programming

      Public
      four class series on programming in python: for loops, conditional statements, functions, debugging
      pythontrainingtutorialprogramming
      Jupyter Notebook
      •
      Other
      •1•3•5•0•Updated May 3, 2021May 3, 2021

    • rnaseq

      Public
      UNDER CONSTRUCTION: concepts and skills related to RNAseq analyses
      Shell
      •
      Other
      •0•0•7•0•Updated Apr 29, 2021Apr 29, 2021

    • unix_shell_intro

      Public
      UNDER CONSTRUCTION: four class introduction to the unix command line, including shell scripting and using HPC resources
      Other
      •1•0•4•0•Updated Apr 14, 2021Apr 14, 2021

    • practice-covid-19

      Public
      data analysis suggestions to practice reproducible computational methods for COVID-19 data
      Jupyter Notebook
      •0•1•1•0•Updated Mar 30, 2021Mar 30, 2021

    • python_intro

      Public
      four class intro to python: basic syntax, data manipulation, data viz
      trainingcancerpythonlessons
      Jupyter Notebook
      •
      Other
      •10•9•8•0•Updated Mar 30, 2021Mar 30, 2021

    • genomics

      Public
      UNDER CONSTRUCTION: training material drafts for genomics data, analysis, and workflows
      Other
      •0•0•1•0•Updated Mar 19, 2021Mar 19, 2021

    • coding_for_cancer

      Public
      An introduction to computational thinking and performing biomedical research with R for high school students
      trainingeducationcomputational-biologyhighschoolbiomedicalcomputational-thinkingbiomedical-data-science
      Other
      •0•5•5•0•Updated Mar 19, 2021Mar 19, 2021

    • curriculum_contribution

      Public
      guidelines for contributing to fredhutch.io courses
      1•0•14•0•Updated Mar 18, 2021Mar 18, 2021

    • ml-pancancer-example

      Public
      Jupyter Notebook
      •
      Other
      •1•16•4•1•Updated Mar 14, 2021Mar 14, 2021

    • ml-melanoma-example

      Public
      Jupyter Notebook
      •
      Other
      •0•1•0•0•Updated Mar 10, 2021Mar 10, 2021

    • course_template

      Public template
      file structure and outlines for course materials
      Other
      •0•0•1•0•Updated Feb 18, 2021Feb 18, 2021

    • python_machine_learning

      Public
      fredhutch.io's four-class overview of machine learning methods and applications
      Jupyter Notebook
      •
      Other
      •1•1•7•0•Updated Dec 31, 2020Dec 31, 2020

    • concepts_machine_learning

      Public
      four class introduction to machine learning principles
      machine-learning
      Other
      •3•3•8•0•Updated Dec 31, 2020Dec 31, 2020

    • r_intro

      Public
      four class intro to R: basic syntax, data manipulation, data viz
      trainingrtidyversecancerlessons
      R
      •
      Other
      •13•20•10•0•Updated Dec 31, 2020Dec 31, 2020

    • r_machine_learning

      Public
      UNDER CONSTRUCTION: four class series on machine learning in R
      HTML
      •
      Other
      •0•0•7•0•Updated Dec 31, 2020Dec 31, 2020

    • hpc_on_premise

      Public
      fredhutch.io's overview of on-premise HPC resources for research computing
      Other
      •0•0•2•0•Updated Dec 31, 2020Dec 31, 2020

    • instructors

      Public
      Information and links for fredhutch.io instructors
      0•1•3•0•Updated Dec 29, 2020Dec 29, 2020

    • scRNAseq

      Public
      UNDER CONSTRUCTION: training material for single cell RNAseq analysis
      Other
      •0•2•9•0•Updated Dec 29, 2020Dec 29, 2020

    • data_for_data_science

      Public
      UNDER REVISION four class intro to data management: spreadsheets, project organization, metadata, reproducibility
      Other
      •1•0•3•0•Updated Dec 29, 2020Dec 29, 2020

    • tfcb_2020

      Public
      Class materials for MCB536 through UW/Fred Hutch
      HTML
      •12•4•4•0•Updated Dec 10, 2020Dec 10, 2020

    • tfcb_capstone

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Dec 10, 2020Dec 10, 2020

    • example_analysis_repo

      Public
      example data analysis with git history for intro to git and github
      R
      •0•0•0•0•Updated Nov 16, 2020Nov 16, 2020

    • python_intro_hdc

      Public archive
      four week intro to python: basic syntax, data manipulation, data viz, machine learning
      pythontrainingcancerlessons
      Jupyter Notebook
      •1•0•0•0•Updated Jan 9, 2020Jan 9, 2020

    • tfcb_2019

      Public
      class materials for MCB517A through UW/Fred Hutch
      JavaScript
      •10•10•5•0•Updated Dec 5, 2019Dec 5, 2019

    • 2019-01-22-fredhutch

      Public
      website for January 22, 2019 Fred Hutch Software Carpentry workshop
      Python
      •
      Other
      •0•0•0•0•Updated Jan 22, 2019Jan 22, 2019