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    33 repositories

    • resolwe-bio

      Public
      Bioinformatics pipelines for Resolwe
      Python
      •
      Apache License 2.0
      •34•17•1•3•Updated Nov 18, 2024Nov 18, 2024

    • resolwe

      Public
      Open source dataflow engine in Django
      Python
      •
      Apache License 2.0
      •27•34•0•8•Updated Nov 18, 2024Nov 18, 2024

    • resolwe-bio-py

      Public
      Resolwe Bioinformatics Python API
      Python
      •
      Apache License 2.0
      •25•4•4•2•Updated Nov 8, 2024Nov 8, 2024

    • resolwe-runtime-utils

      Public
      Runtime utilities for Resolwe dataflow engine
      Python
      •
      Apache License 2.0
      •8•0•0•1•Updated Nov 6, 2024Nov 6, 2024

    • ngs-test-utils

      Public
      Python
      •
      Apache License 2.0
      •2•0•0•0•Updated Nov 4, 2024Nov 4, 2024

    • resolwe-docker-images

      Public
      Docker images for resolwe and resolwe-bio
      Shell
      •
      Apache License 2.0
      •7•0•0•0•Updated Sep 4, 2024Sep 4, 2024

    • RNAnorm

      Public
      Normalization of RNA-seq gene expression
      Python
      •
      Apache License 2.0
      •15•70•1•1•Updated Dec 11, 2023Dec 11, 2023

    • ansible-postgresql-role

      Public
      Ansible role to install and configure the PostgreSQL database on RHEL/CentOS 7 systems using the PostgreSQL Red Hat/CentOS Software Collection.
      Jinja
      •3•0•0•0•Updated Sep 28, 2023Sep 28, 2023

    • ansible-common

      Public
      Common ansible role to manage EL7 servers
      Jinja
      •
      GNU General Public License v3.0
      •3•0•0•1•Updated Sep 28, 2023Sep 28, 2023

    • resolwe-js

      Public
      Resolwe frontend
      TypeScript
      •
      Apache License 2.0
      •8•4•0•0•Updated Jul 18, 2023Jul 18, 2023

    • django-demo

      Public
      A demo application for Junior DevOps Engineer interview assignment.
      Python
      •0•0•0•0•Updated Apr 19, 2023Apr 19, 2023

    • django-priority-batch

      Public
      Prioritized batcher middleware for Django
      Python
      •
      Apache License 2.0
      •4•1•0•1•Updated Apr 10, 2023Apr 10, 2023

    • jbrowse-built

      Public
      Custom built version of https://github.com/GMOD/jbrowse
      Perl
      •
      Other
      •0•0•0•25•Updated Dec 8, 2022Dec 8, 2022

    • ChIPQC

      Public
      R
      •1•0•0•0•Updated May 19, 2022May 19, 2022

    • django-rest-framework-reactive

      Public
      Making Django REST Framework reactive
      Python
      •
      Apache License 2.0
      •11•71•0•0•Updated Mar 14, 2022Mar 14, 2022

    • ansible-docker-role

      Public
      Ansible role to install and configure Docker container engine on RHEL/CentOS 7.
      Jinja
      •
      GNU General Public License v3.0
      •3•0•0•0•Updated Aug 16, 2021Aug 16, 2021

    • iCount

      Public
      iCount, protein-RNA interaction analytics
      Python
      •
      Other
      •26•0•0•0•Updated Aug 31, 2020Aug 31, 2020

    • ansible-security-linux-audit

      Public
      CIS benchmark for Linux system, audit version.
      1•0•0•1•Updated May 18, 2020May 18, 2020

    • ansible-elasticsearch-role

      Public
      Ansible role to install and configure Elasticsearch 6.0 on RHEL/CentOS 7.
      GNU General Public License v3.0
      •1•0•0•0•Updated Dec 10, 2019Dec 10, 2019

    • genesis-pyapi

      Public archive
      GenAPI is a Python API for the Genesis platform.
      Python
      •
      Apache License 2.0
      •7•2•0•1•Updated Nov 4, 2019Nov 4, 2019

    • ansible-postfix-aws

      Public archive
      Ansible role fo set up Postfix with AWS SES service.
      GNU General Public License v3.0
      •9•0•0•0•Updated Oct 28, 2019Oct 28, 2019

    • ansible-update-role

      Public archive
      Ansible role to update and reboot (if necessary) Fedora, Red Hat/CentOS and Debian systems.
      GNU General Public License v3.0
      •2•0•0•0•Updated Oct 28, 2019Oct 28, 2019

    • MultiQC

      Public archive
      Aggregate results from bioinformatics analyses across many samples into a single report.
      Python
      •
      GNU General Public License v3.0
      •603•0•0•0•Updated Apr 12, 2019Apr 12, 2019

    • shRNAde

      Public
      Part of shRNA pipeline.
      bioinformaticsngsdifferential-expressionshrna
      R
      •0•0•0•0•Updated Mar 11, 2019Mar 11, 2019

    • docker-bio-linux8-resolwe

      Public archive
      Containerized version of Bio-Linux 8 tailored for Resolwe.
      Dockerfile
      •
      Apache License 2.0
      •2•1•1•19•Updated Dec 13, 2018Dec 13, 2018

    • escher

      Public archive
      Build, view, share, and embed pathway maps.
      JavaScript
      •
      Other
      •77•0•0•0•Updated Aug 2, 2018Aug 2, 2018

    • gotea

      Public
      GO Term Enrichment Analysis
      C++
      •2•0•2•0•Updated Mar 28, 2018Mar 28, 2018

    • biox

      Public archive
      Python
      •0•0•0•0•Updated Aug 29, 2017Aug 29, 2017

    • DefinitelyTyped

      Public archive
      The repository for high quality TypeScript type definitions.
      TypeScript
      •
      Other
      •30k•0•0•0•Updated Jan 5, 2017Jan 5, 2017

    • genesis-genex

      Public archive
      Genesis example GenApp.
      JavaScript
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Feb 15, 2016Feb 15, 2016