Hancock Lab

All

12 repositories

pathlinkR
Public
Analysis and visualization of RNA-Seq results
visualization bioinformatics r networks pathway-enrichment-analysis
R
•
GNU General Public License v3.0
•1•19•0•0•Updated Nov 6, 2024Nov 6, 2024
ABCindex
Public
A web app to calculate Anti-Biofilm Combination Index (ABCI)
bioinformatics r shiny assay biofilm
R
•
GNU General Public License v3.0
•0•2•0•0•Updated Jul 24, 2024Jul 24, 2024
SeptiSearch
Public
Shiny app that facilitates access and exploration of manually-curated, published sepsis data.
bioinformatics r database shiny data-visualization sepsis
CSS
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GNU General Public License v3.0
•3•1•0•0•Updated Jun 25, 2024Jun 25, 2024
MetaBridgeShiny
Public
Repository for the MetaBridge Shiny app.
utility bioinformatics shiny metabolomics integrative-analysis
R
•
GNU General Public License v3.0
•0•2•0•0•Updated May 30, 2024May 30, 2024
pathlinkRdocs
Public archive
Full vignette for Bioconductor package pathlinkR
GNU General Public License v3.0
•0•0•0•0•Updated Mar 5, 2024Mar 5, 2024
SeptiSearchTutorial
Public archive
Repository holding the tutorial pages for SeptiSearch. Made with Jekyll/JustTheDocs!
Ruby
•
MIT License
•0•0•0•0•Updated Aug 22, 2023Aug 22, 2023
clusterPathways
Public
Use Jaccard index and constituent genes to identify groups of similar pathways
visualization bioinformatics clustering pathway-analysis
R
•
GNU General Public License v3.0
•0•1•0•0•Updated Dec 12, 2022Dec 12, 2022
misc_R_scripts
Public
Miscellaneous R code
R
•0•1•0•0•Updated Jan 6, 2022Jan 6, 2022
sigora
Public
Fork of the sigora repository for Arjun Baghela and Travis Blimkie to begin work on updates to the package.
R
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GNU General Public License v2.0
•3•0•0•0•Updated Sep 28, 2021Sep 28, 2021
EssentialTnSeq
Public
TnSeq Essentiality Analysis
bioinformatics pipeline tnseq
R
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Other
•0•2•0•0•Updated May 10, 2021May 10, 2021
BacterialToolkit
Public
Collection of Functions for Working on Bacterial Projects
R
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Other
•0•0•0•0•Updated Feb 28, 2020Feb 28, 2020
hancock_data
Public
0•0•0•0•Updated Jun 6, 2019Jun 6, 2019