Harvard Medical School - Department of Biomedical Informatics

All

360 repositories

pic-sure-bdc-release-control
Public
Apache License 2.0
•8•1•0•0•Updated Oct 31, 2024Oct 31, 2024
picsure-dictionary
Public
Java
•
Apache License 2.0
•1•0•0•1•Updated Oct 31, 2024Oct 31, 2024
biodata_catalyst_stigmatizing_variables
Public
Jupyter Notebook
•
Apache License 2.0
•0•1•0•2•Updated Oct 31, 2024Oct 31, 2024
i2b2v2-webclient
Public
JavaScript
•4•2•1•1•Updated Oct 31, 2024Oct 31, 2024
pic-sure-bdc-infrastructure
Public
HCL
•
Apache License 2.0
•1•5•0•3•Updated Oct 31, 2024Oct 31, 2024
Service_Workbench_Templates
Public
Templates for AWS Service Workbench from Relevance Lab
Python
•13•0•0•3•Updated Oct 31, 2024Oct 31, 2024
PIC-SURE-Frontend
Public
A frontend for the PIC-SURE API
TypeScript
•
Apache License 2.0
•0•1•0•6•Updated Oct 31, 2024Oct 31, 2024
pic-sure-auth-microapp
Public
Java
•
Apache License 2.0
•5•4•0•2•Updated Oct 31, 2024Oct 31, 2024
actions
Public
0•0•0•30•Updated Oct 30, 2024Oct 30, 2024
vizarr
Public
A minimal Zarr image viewer based on Viv.
jupyter-notebooks gehlenborglab zarr viv imjoy
TypeScript
•
MIT License
•18•121•17•8•Updated Oct 30, 2024Oct 30, 2024
pic-sure-public-datasets
Public
Public datasets available for PIC-SURE
Apache License 2.0
•0•0•0•0•Updated Oct 29, 2024Oct 29, 2024
ETL-MissionControl-dbgap-submodule
Public
ETL-MissionControl-dbgap-submodule
Shell
•
Apache License 2.0
•0•0•0•0•Updated Oct 29, 2024Oct 29, 2024
ETLToolSuite-EntityGenerator
Public
This tool will generate Entity Files that can be used to load into Datasources.
Java
•
Apache License 2.0
•0•0•0•0•Updated Oct 29, 2024Oct 29, 2024
pic-sure-hpds
Public
Java
•
Apache License 2.0
•6•3•0•8•Updated Oct 29, 2024Oct 29, 2024
pic-sure-all-in-one
Public
Shell
•
Apache License 2.0
•12•4•3•2•Updated Oct 28, 2024Oct 28, 2024
pic-sure-metadata-curation
Public
Parse and generate variable-level data to be exposed through the search interface.
SAS
•
Apache License 2.0
•2•2•0•0•Updated Oct 28, 2024Oct 28, 2024
pic-sure-baseline-release-control
Public
5•0•0•0•Updated Oct 28, 2024Oct 28, 2024
cellpop
Public
TypeScript
•
MIT License
•1•0•11•1•Updated Oct 28, 2024Oct 28, 2024
hypatio-app
Public
Python
•0•4•0•7•Updated Oct 28, 2024Oct 28, 2024
dbmi-fileservice
Public
Python
•0•2•0•4•Updated Oct 28, 2024Oct 28, 2024
fhirquestionnaire
Public
HTML
•0•2•0•4•Updated Oct 28, 2024Oct 28, 2024
gehlenborglab-website
Public
Code for Gehlenborg Lab website.
website gehlenborglab hidivelab
TypeScript
•
MIT License
•38•8•21•21•Updated Oct 28, 2024Oct 28, 2024
pic-sure-gic-institution-release-control
Public
Apache License 2.0
•0•0•0•0•Updated Oct 24, 2024Oct 24, 2024
pic-sure-gic-institution-frontend
Public
JavaScript
•
Apache License 2.0
•0•1•0•1•Updated Oct 24, 2024Oct 24, 2024
PIC-SURE-Migrations
Public
Database migrations for the PIC-SURE All-in-One.
Apache License 2.0
•0•0•0•1•Updated Oct 24, 2024Oct 24, 2024
pic-sure
Public
PIC-SURE API
Java
•
Apache License 2.0
•3•5•0•7•Updated Oct 23, 2024Oct 23, 2024
avillachlab-jenkins
Public
HCL
•
Apache License 2.0
•6•5•0•0•Updated Oct 23, 2024Oct 23, 2024
dbmisvc-docker
Public
A framework for bootstrapping services in a Docker image
Python
•1•2•0•0•Updated Oct 23, 2024Oct 23, 2024
dseqr
Public
single-cell and bulk RNA-seq analyses from counts → pathways → drug candidates.
rna-seq drug-repurposing single-cell-rna-seq bulk-rna-seq
R
•
Other
•4•20•0•0•Updated Oct 21, 2024Oct 21, 2024
dseqr.data
Public
data for drugseqr package
R
•
Other
•0•0•1•0•Updated Oct 21, 2024Oct 21, 2024