Repositories list

• CM4AI_LLM_Challenge

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Nov 5, 2024Nov 5, 2024

• G2PT

  Public
  Python

  •0•4•1•1•Updated Nov 5, 2024Nov 5, 2024

• llm_evaluation_for_gene_set_interpretation

  Public
  Code space for 'Evaluation of large language models for discovery of gene set function'

  Jupyter Notebook

  •

  MIT License

  •3•11•1•0•Updated Nov 5, 2024Nov 5, 2024

• network-viewer

  Public
  TypeScript

  •0•1•0•1•Updated Nov 3, 2024Nov 3, 2024

• cellmaps_vnn

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Nov 1, 2024Nov 1, 2024

• enrichment_service

  Public
  Python

  •

  Other

  •0•0•0•0•Updated Oct 30, 2024Oct 30, 2024

• cellmaps_utils

  Public
  Python

  •

  MIT License

  •0•1•4•0•Updated Oct 28, 2024Oct 28, 2024

• test_cyweb_service_app

  Public
  Python

  •

  Other

  •0•0•0•0•Updated Oct 22, 2024Oct 22, 2024

• KEGGscape

  Public
  A Cytoscape app for importing KGML(KEGG pathway XML)

  Java

  •

  Apache License 2.0

  •11•23•18•0•Updated Oct 22, 2024Oct 22, 2024

• pyNBS

  Public
  Python 2.7 implementation of network-based stratification (NBS) algorithm from Hofree et al (Nature Methods 2013)

  Jupyter Notebook

  •

  MIT License

  •22•38•5•0•Updated Oct 18, 2024Oct 18, 2024

• cdapsutil

  Public
  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Oct 18, 2024Oct 18, 2024

• cellmaps_hierarchyeval

  Public
  Code for hierarchy evaluation

  Python

  •

  MIT License

  •0•0•0•0•Updated Oct 18, 2024Oct 18, 2024

• cellmaps_generate_hierarchy

  Public
  Python

  •

  MIT License

  •0•0•1•0•Updated Oct 18, 2024Oct 18, 2024

• cellmaps_coembedding

  Public
  Python

  •

  MIT License

  •0•0•1•0•Updated Oct 18, 2024Oct 18, 2024

• cellmaps_ppi_embedding

  Public
  Python

  •

  MIT License

  •1•0•0•0•Updated Oct 17, 2024Oct 17, 2024

• cellmaps_image_embedding

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Oct 17, 2024Oct 17, 2024

• cellmaps_imagedownloader

  Public
  Python

  •

  MIT License

  •0•0•5•0•Updated Oct 17, 2024Oct 17, 2024

• cellmaps_ppidownloader

  Public
  Python

  •

  MIT License

  •0•0•2•0•Updated Oct 17, 2024Oct 17, 2024

• communitydetection_serviceapp

  Public
  Python

  •

  Other

  •0•0•0•0•Updated Oct 16, 2024Oct 16, 2024

• cellmaps_annotate_hierarchy

  Public
  Jupyter Notebook

  •

  MIT License

  •0•1•0•0•Updated Sep 27, 2024Sep 27, 2024

• cellmaps_pipeline

  Public
  Python

  •

  MIT License

  •0•4•0•0•Updated Sep 26, 2024Sep 26, 2024

• cellmaps_seqms_ppi_gen

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Sep 5, 2024Sep 5, 2024

• cookiecutter-musicpypackage

  Public
  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Sep 5, 2024Sep 5, 2024

• ndex-edge-filter4Hiview

  Public
  An edge filtering service for Hiview.

  Java

  •

  MIT License

  •0•0•0•2•Updated Aug 30, 2024Aug 30, 2024

• GSAI

  Public
  TypeScript

  •0•1•0•0•Updated Jul 30, 2024Jul 30, 2024

• cdiquerygenestoterm

  Public
  Python

  •

  Other

  •0•0•0•2•Updated Jun 19, 2024Jun 19, 2024

• nest_vnn

  Public
  NeST-VNN repo

  Python

  •

  MIT License

  •4•10•0•0•Updated Jun 4, 2024Jun 4, 2024

• cy-net-share

  Public
  A simple web application to share network files generated with Cytoscape.

  JavaScript

  •7•9•7•1•Updated May 3, 2024May 3, 2024

• large-graph-renderer

  Public
  Webpack version of LGR

  TypeScript

  •

  MIT License

  •1•2•1•5•Updated Apr 14, 2024Apr 14, 2024

• web.cytoscape

  Public
  New version of cyNetShare

  JavaScript

  •

  MIT License

  •1•7•1•0•Updated Apr 3, 2024Apr 3, 2024