Immunoinformatics

All

8 repositories

tcr
Public
[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.
bioinformatics immunology ig bioinformatics-analysis immunoinformatics tcr-repertoire ig-repertoire data-analysis tcr
R
•22•37•0•0•Updated Jun 8, 2020Jun 8, 2020
ymir
Public
(Under development) Computational framework for probabilistic models of immune receptor assembling.
bioinformatics immunology t-cell-receptor ig immunoglobulin immunoinformatics vdj-recombination statistical-immunoinformatics tcr probabilistic-models
C++
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Apache License 2.0
•1•1•1•0•Updated Aug 6, 2018Aug 6, 2018
mhc
Public
machine-learning bioinformatics deep-learning immunology mhc immunoinformatics
Jupyter Notebook
•1•3•0•0•Updated Apr 25, 2017Apr 25, 2017
immdeep
Public
machine-learning bioinformatics deep-learning immunology immunoinformatics computational-immunology
Jupyter Notebook
•1•0•0•0•Updated Apr 20, 2017Apr 20, 2017
lynxy
Public
C++
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Apache License 2.0
•0•0•9•0•Updated Aug 8, 2016Aug 8, 2016
mhc-prediction-project
Public
MHC:peptide binding prediction. Project was done by students at the 4th Bioinformatics Summer School in July 2016.
Jupyter Notebook
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MIT License
•0•0•0•0•Updated Aug 2, 2016Aug 2, 2016
mrd-paper
Public
Code for the paper on TCR gene rearrangements in minimal residual disease (MRD).
Python
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Apache License 2.0
•1•0•0•0•Updated Mar 10, 2016Mar 10, 2016
hex
Public
(Halted, unfinished) HLA Extractor - a simple HLA typing tool.
Jupyter Notebook
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Apache License 2.0
•1•3•1•0•Updated Feb 11, 2016Feb 11, 2016