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clusty
PublicSPLASH
Public- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) among virus and bacteria genomes
vclust
PublicFast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomeskmer-db
PublicKmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, etc.).FAMSA
PublicAlgorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)KMC
PublicPHIST
PublicPhage-Host Interaction Search Toolref-utils
Publicprotestar
Publiccolord
PublicA versatile compressor of third generation sequencing reads.agc
Publicfqsqueezer
PublicFQSqueezer - FASTQ compressor based on k-mer statisticsRECKONER
PublicWhisper
PublicDSRC
PublicGDC2
PublicTGC
PublicQuickProbs
PublicMuGI
PublicCoMSA
PublicGTC
PublicGTShark
PublicVCFShark
PublicORCOM
PublicFaStore
PublicRADULS
Public