Releases · paninski-lab/lightning-pose

13 Nov 02:57

themattinthehatt

v1.6.0

f7339f0

v1.6.0 Latest

Latest

What's Changed

Major updates for this release include multi-GPU training, new imgaug transforms, and many small usability improvements

update sleap2lp.py by @themattinthehatt in #196
Upgrade sphinx-rtd-theme to fix search #200 by @ksikka in #201
Fix search attempt 2. Fix #200 by @ksikka in #202
Log hydra job config to tensorboard by @ksikka in #204
Change backbone finetuning strategy to allow for DDP by @ksikka in #205
Support multi-GPU training for supervised training by @ksikka in #206
Multi-GPU support for unsupervised learning by @ksikka in #207
Continuous integration using github actions by @ksikka in #208
add coarse salt/pepper to imgaug transforms by @themattinthehatt in #209
Added option to choose colormap for labelled videos by @hummuscience in #211
complete config file documentation by @themattinthehatt in #213
Add PCA Centering method (experimental) by @ksikka in #214
Context frames can use any delimiter by @ksikka in #216
Replace relative paths with absolute paths in demo config by @ksikka in #217
Fix doc build failure by @ksikka in #218
Update README.md with downloads/week badge by @ksikka in #219

New Contributors

@ksikka made their first contribution in #201

Full Changelog: v1.5.1...v1.6.0

Contributors

ksikka, hummuscience, and themattinthehatt

Assets 2

31 Jul 21:13

themattinthehatt

v1.5.1

9ab1514

v1.5.1

Several small updates, as well as reverting the default training setup to automatically save out the best model according to validation metrics, rather than the last model.

make sure validation loader always has at least one sample
allow for early stopping again, as well as saving out model weights every n epochs
make training fully deterministic
increase flexibility of LitDaliWrapper to work with custom dali video pipeline functions
increase flexibility of keypoint correspondence array for true multiview datasets

Assets 2

18 Jul 19:23

themattinthehatt

v1.5.0

2a21393

v.1.5.0

What's Changed

Passing vfr_check to fn.readers.video by @hummuscience in #179, #180
remove augmentations for val/test data by @themattinthehatt in #181
implement pca object that handles NaNs by @themattinthehatt in #184
support for multiple data streams by @themattinthehatt @farzad-ziaie @Selmaan in #187

Full Changelog: v1.4.0...v1.5.0

Contributors

hummuscience, Selmaan, and 2 other contributors

Assets 2

17 Jun 21:59

themattinthehatt

v1.4.0

7828c32

v1.4.0

What's Changed

[docs] avi vs mp4 faq by @themattinthehatt in #151
WSL installation instructions by @DavidGill159 in #153
generalize keypoint access from dataframes in metrics by @themattinthehatt in #154
ignore hidden "_labeled" folders in dlc to lp conversion by @hummuscience in #157
misc updates to docs and tests by @themattinthehatt in #162
add new unit test fixture by @themattinthehatt in #163
[fix] streamlit video page bugfix by @themattinthehatt in #167
add sleap2lp file by @Shmuel-columbia in #168
update dependencies
add backbone pretrained on hand dataset
save multiple checkpoint files

New Contributors

@DavidGill159 made their first contribution in #153
@hummuscience made their first contribution in #157
@Shmuel-columbia made their first contribution in #168

Full Changelog: v1.3.0...v1.4.0

Contributors

hummuscience, themattinthehatt, and 2 other contributors

Assets 2

17 Apr 16:44

themattinthehatt

v1.3.0

b8cb8f4

v1.3.0

What's Changed

FIX: predict_new_vids.py now outputs unsupervised metrics as well by @EugenioBertolini in #145
[docs] update config file info by @themattinthehatt in #147
v1.3.0 updates by @themattinthehatt in #149
- generalize method of accessing likelihood in apps
- generalize subdirectory names used by video app
- move version def from setup.py to __init__.py
- refactor train_hydra script to import a train function for greater flexibility