diff --git a/tests/local/tests.models-3.R b/tests/local/tests.models-3.R index 092b4ac94..5a53208a7 100644 --- a/tests/local/tests.models-3.R +++ b/tests/local/tests.models-3.R @@ -68,7 +68,7 @@ test_that("generalized extreme value models work correctly", { bf(SeaLevel ~ cYear + SOI, sigma ~ s(cYear, bs = "bs", m = 1, k = 3) + SOI), data = fremantle, family = gen_extreme_value(), - knots = knots, inits = 0.5, chains = 4, + knots = knots, init = 0.5, chains = 4, control = list(adapt_delta = 0.95), refresh = 0 ) print(fit_gev) @@ -182,22 +182,22 @@ test_that("Mixture models work correctly", { fit1 <- brm( bform1, data = dat, family = mixfam, prior = c(prior, prior(dirichlet(1, 1, 1), theta)), - chains = 2, inits = 0, refresh = 0 + chains = 2, init = 0, refresh = 0, seed = 1234 ) print(fit1) expect_ggplot(pp_check(fit1)) - loo1 <- LOO(fit1) + loo1 <- loo(fit1) expect_equal(dim(pp_mixture(fit1)), c(nobs(fit1), 4, 3)) bform2 <- bf(bform1, theta1 = 1, theta2 = 1, theta3 = 1) fit2 <- brm( bform2, data = dat, family = mixfam, prior = prior, chains = 2, - inits = 0, refresh = 0 + init = 0, refresh = 0 ) print(fit2) expect_ggplot(pp_check(fit2)) - loo2 <- LOO(fit2) + loo2 <- loo(fit2) expect_gt(loo2$estimates[3, 1], loo1$estimates[3, 1]) expect_equal(dim(pp_mixture(fit2)), c(nobs(fit2), 4, 3)) diff --git a/tests/local/tests.models-5.R b/tests/local/tests.models-5.R index 2bb82d756..28ba6bc51 100644 --- a/tests/local/tests.models-5.R +++ b/tests/local/tests.models-5.R @@ -169,21 +169,21 @@ test_that("projpred methods can be run", { test_that("alternative algorithms can be used", { fit <- brm( - count ~ zBase * Trt, data = epilepsy, + count ~ zBase, data = epilepsy, backend = "cmdstanr", algorithm = "meanfield" ) summary(fit) expect_is(fit, "brmsfit") fit <- brm( - count ~ zBase * Trt, data = epilepsy, + count ~ zBase, data = epilepsy, backend = "cmdstanr", algorithm = "pathfinder" ) summary(fit) expect_is(fit, "brmsfit") fit <- brm( - count ~ zBase * Trt, data = epilepsy, + count ~ zBase, data = epilepsy, backend = "cmdstanr", algorithm = "laplace" ) summary(fit)