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setup.py
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#!/usr/bin/env python
# How to build source distribution
# python setup.py sdist --format bztar
# python setup.py sdist --format gztar
# python setup.py sdist --format zip
import os
from setuptools import setup
MAJOR = 0
MINOR = 1
MICRO = 4
VERSION = "{}.{}.{}".format(MAJOR, MINOR, MICRO)
def write_version_file(fn=None):
if fn is None:
fn = os.path.join(
os.path.dirname(os.path.abspath(__file__)),
os.path.join("region_plot", "version.py"),
)
content = ("\n# THIS FILE WAS AUTOMATICALLY GENERATED BY POST_GWAS SETUP\n"
'region_plot_version = "{version}"\n')
a = open(fn, "w")
try:
a.write(content.format(version=VERSION))
finally:
a.close()
def setup_package():
# Saving the version into a file
write_version_file()
setup(
name="region-plot",
version=VERSION,
description="Plots significant regions of GWAS.",
author="Louis-Philippe Lemieux Perreault",
author_email="louis-philippe.lemieux.perreault@statgen.org",
url="http://www.statgen.org",
license="CC BY-NC 4.0",
entry_points={
"console_scripts": [
"launch-region-plot=region_plot.cli:main",
],
},
packages=["region_plot"],
install_requires=["numpy >= 1.9.1", "pandas >= 0.17.0", "six >= 1.9.0",
"matplotlib >= 1.4.3", "gepyto >= 0.9.2",
"geneparse >= 0.7.0"],
classifiers=[
"Intended Audience :: Science/Research",
"License :: Free for non-commercial use",
"Operating System :: Unix",
"Operating System :: POSIX :: Linux",
"Operating System :: MacOS :: MacOS X",
"Operating System :: Microsoft :: Windows",
"Programming Language :: Python",
"Programming Language :: Python :: 2.7",
"Programming Language :: Python :: 3.3",
"Programming Language :: Python :: 3.4",
"Topic :: Scientific/Engineering :: Bio-Informatics",
],
)
return
if __name__ == "__main__":
setup_package()