Switched to mkdir -p

phac-nml · Jan 24, 2024 · 4c1a47b · 4c1a47b
1 parent d8a1899
commit 4c1a47b
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/modules/local/sratools/fasterqdump/main.nf b/modules/local/sratools/fasterqdump/main.nf
@@ -37,7 +37,7 @@ process SRATOOLS_FASTERQDUMP {
 
     # Make directory ahead of time since otherwise
     # fasterq-dump does not set correct permissions/owner
-    mkdir reads
+    mkdir -p reads
 
     fasterq-dump \\
         $args \\