From 4c1a47b16ff4eb57b74a12376bf1fb8ce5a32f6f Mon Sep 17 00:00:00 2001
From: Aaron Petkau <aaron.petkau@gmail.com>
Date: Wed, 24 Jan 2024 15:27:13 -0600
Subject: [PATCH] Switched to mkdir -p

---
 modules/local/sratools/fasterqdump/main.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/modules/local/sratools/fasterqdump/main.nf b/modules/local/sratools/fasterqdump/main.nf
index ea055c5..66ba956 100644
--- a/modules/local/sratools/fasterqdump/main.nf
+++ b/modules/local/sratools/fasterqdump/main.nf
@@ -37,7 +37,7 @@ process SRATOOLS_FASTERQDUMP {
 
     # Make directory ahead of time since otherwise
     # fasterq-dump does not set correct permissions/owner
-    mkdir reads
+    mkdir -p reads
 
     fasterq-dump \\
         $args \\