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Request to close 233 - iRecist vignette initial draft #265

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Dec 13, 2023
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8f5210f
233 - iRecist vignette initial draft
vinhn23 Nov 9, 2023
33bbce6
Merge branch 'main' into 233_iRECIST_vignette_main
bundfussr Nov 9, 2023
b85bdef
Merge branch '256_admiral_updates' into 233_iRECIST_vignette_main
bundfussr Nov 9, 2023
70e5350
233 - irecist vignette review update 1
vinhn23 Nov 15, 2023
10f3aa4
233 - iRECIST vignette - addressed 1st round comments
vinhn23 Nov 20, 2023
91b8316
Merge branch '233_iRECIST_vignette_main' of github.com:pharmaverse/ad…
bundfussr Nov 21, 2023
169bcb6
233 - iRECIST vignette - 2nd round comments
vinhn23 Nov 28, 2023
9ffd0d7
#233 iRECIST_vignette_main: add handling of RECIST/iRECIST mixture
bundfussr Nov 29, 2023
45cfaca
Merge branch '233_iRECIST_vignette_main' of github.com:pharmaverse/ad…
bundfussr Nov 29, 2023
fee44c3
#233 iRECIST_vignette_main: fix links
bundfussr Nov 29, 2023
4e15d52
#233 iRECIST_vignette_main: fix spelling
bundfussr Nov 29, 2023
ff65905
#233 iRECIST_vignette_main: style files
bundfussr Nov 29, 2023
48ee1bb
#233 iRECIST_vignette_main: fix typos
bundfussr Dec 5, 2023
83d4e66
#233 - iRECIST vignette - 3rd round comment update.
vinhn23 Dec 6, 2023
4eddbec
233 - updated sort for AVAL
vinhn23 Dec 8, 2023
070e058
#233 iRECIST_vignette_main: add changelog item
bundfussr Dec 12, 2023
1b6857c
Merge branch 'main' into 233_iRECIST_vignette_main
bundfussr Dec 12, 2023
cd2b86e
#233 iRECIST_vignette_main: clean up Changelog
bundfussr Dec 12, 2023
617e32e
Merge branch 'main' into 233_iRECIST_vignette_main
bundfussr Dec 13, 2023
e31da2b
Merge branch 'main' into 233_iRECIST_vignette_main
bundfussr Dec 13, 2023
2719463
#233 iRECIST_vignette_main: fix links
bundfussr Dec 13, 2023
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4 changes: 1 addition & 3 deletions .github/pull_request_template.md
Original file line number Diff line number Diff line change
@@ -1,6 +1,3 @@
Please add "Closes #<issue number>" to the title of the pull request. Then the
issue is closed automatically once it is merged to `main`.

Thank you for your Pull Request! We have developed this task checklist from the
[Development Process
Guide](https://pharmaverse.github.io/admiral/CONTRIBUTING.html#detailed-development-process)
Expand All @@ -13,6 +10,7 @@ or check off that it is not relevant to your Pull Request. This checklist is
part of the Github Action workflows and the Pull Request will not be merged into
the `main` branch until you have checked off each task.

- [ ] Place Closes #<insert_issue_number> into the beginning of your Pull Request Title (Use Edit button in top-right if you need to update). Then the issue is closed automatically once it is merged to `main`.
- [ ] Code is formatted according to the [tidyverse style guide](https://style.tidyverse.org/). Run `styler::style_file()` to style R and Rmd files
- [ ] Updated relevant unit tests or have written new unit tests - See [Unit Test Guide](https://pharmaverse.github.io/admiraldev/articles/unit_test_guidance.html#writing-unit-tests-in-admiral)
- [ ] If you removed/replaced any function and/or function parameters, did you fully follow the [deprecation guidance](https://pharmaverse.github.io/admiraldev/articles/programming_strategy.html#deprecation)?
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10 changes: 6 additions & 4 deletions NEWS.md
Original file line number Diff line number Diff line change
@@ -1,11 +1,9 @@
# admiralonco (development version)

## Various

- Website now has button/links to Slack channel and GitHub Issues. (#262)

## Documentation

- New vignette "Creating ADRS with iRECIST endpoints". (#233)

- All vignettes and templates were updated to be in line with the changes in
`{admiral}` (see [Breaking
Changes](https://pharmaverse.github.io/admiral/news/index.html#breaking-changes-1-0-0)
Expand All @@ -23,6 +21,10 @@ won't be deprecated in the near future. (#256)
- The function `call_aval_fun()`, which was deprecated in admiralonco 0.4.0,
has been removed. (#256)

## Various

- Website now has button/links to Slack channel and GitHub Issues. (#262)

# admiralonco 0.5.0

## New Features
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2 changes: 2 additions & 0 deletions _pkgdown.yml
Original file line number Diff line number Diff line change
Expand Up @@ -67,6 +67,8 @@ navbar:
href: articles/adrs_basic.html
- text: Creating ADRS (Including Non-standard Endpoints)
href: articles/adrs.html
- text: Creating ADRS with iRECIST endpoints
href: articles/irecist.html
- text: Creating ADTTE
href: articles/adtte.html
- text: Creating ADTR
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6 changes: 6 additions & 0 deletions inst/WORDLIST
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,12 @@ CDISC
CRF
GlaxoSmithKline
Hoffmann
IBCP
ICBCP
ILSTA
IMDIS
IMWG
IOVRB
IRF
LLC
Myeloma
Expand All @@ -29,6 +34,7 @@ durations
evaluable
fmt
funder
iCPD
iRECIST
myeloma
pharmaverse
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