{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":621507502,"defaultBranch":"master","name":"CRISPR-Correct","ownerLogin":"pinellolab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-03-30T20:02:35.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/30343453?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1718396461.0","currentOid":""},"activityList":{"items":[{"before":"85a089fc98b52161b9cc38468d26be5b7bc7b3ec","after":"f959601ca791c95fcc2e7a3e9a580f04fcf03fe4","ref":"refs/heads/master","pushedAt":"2024-09-18T18:25:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"fb0b5665e9fffb74a16f1d44ac9e1195a8b67742","after":"85a089fc98b52161b9cc38468d26be5b7bc7b3ec","ref":"refs/heads/master","pushedAt":"2024-09-18T17:57:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Create demultiplex_input.json","shortMessageHtmlLink":"Create demultiplex_input.json"}},{"before":"1ab5340534a359e9231a9eeb89691809b910fe2c","after":"fb0b5665e9fffb74a16f1d44ac9e1195a8b67742","ref":"refs/heads/master","pushedAt":"2024-09-10T19:14:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Add license","shortMessageHtmlLink":"Add license"}},{"before":"cc060b5b49a2f02cae772d4da55b46393dbcf884","after":"1ab5340534a359e9231a9eeb89691809b910fe2c","ref":"refs/heads/master","pushedAt":"2024-09-09T03:47:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"8712538adc9fe16c01ccfbe46358e8114438cac2","after":"cc060b5b49a2f02cae772d4da55b46393dbcf884","ref":"refs/heads/master","pushedAt":"2024-09-09T00:26:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Create README.md in-progress\n\nIn progress","shortMessageHtmlLink":"Create README.md in-progress"}},{"before":"f9bbce09da60e47a7e69498b8c7d8bb6d238406a","after":"8b62cb668eff0a50e989139a3b9f7ba4bb4c7dba","ref":"refs/heads/no_umi_support","pushedAt":"2024-07-29T14:12:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Initial working draft of QC","shortMessageHtmlLink":"Initial working draft of QC"}},{"before":"6df5d3f4b2637d47870a3238e07274faa314966d","after":"f9bbce09da60e47a7e69498b8c7d8bb6d238406a","ref":"refs/heads/no_umi_support","pushedAt":"2024-07-24T17:47:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Draft of QC","shortMessageHtmlLink":"Draft of QC"}},{"before":"cd4c99ae12e5c6f9c33a55df6998aa05b735bbd4","after":"6df5d3f4b2637d47870a3238e07274faa314966d","ref":"refs/heads/no_umi_support","pushedAt":"2024-07-17T15:20:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"In progress on quality control","shortMessageHtmlLink":"In progress on quality control"}},{"before":"79cd5e192a2872a1e5068b4068a20c7062f8e280","after":"cd4c99ae12e5c6f9c33a55df6998aa05b735bbd4","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-25T14:16:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Added info on all matches to mapping","shortMessageHtmlLink":"Added info on all matches to mapping"}},{"before":"3fe33545b5d7984fa86414983940f0f7f45cea7a","after":"79cd5e192a2872a1e5068b4068a20c7062f8e280","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-25T13:48:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Fixed dict iteration","shortMessageHtmlLink":"Fixed dict iteration"}},{"before":"14a64f9e1930aadd4c46ed5f1028e250338e4936","after":"3fe33545b5d7984fa86414983940f0f7f45cea7a","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-24T20:45:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Created helper function to map whitelist to observed sequences","shortMessageHtmlLink":"Created helper function to map whitelist to observed sequences"}},{"before":"d90d946d616fa9cafe3aab0b63c2368cbc13ef26","after":"14a64f9e1930aadd4c46ed5f1028e250338e4936","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-14T20:20:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Updated matplotlib to 3.9.0 due to seaborn dependency issue\n\nimport seaborn as sns\nFile \"/opt/venv/lib/python3.10/site-packages/seaborn/__init__.py\", line 9, in \nfrom .matrix import * # noqa: F401,F403\nFile \"/opt/venv/lib/python3.10/site-packages/seaborn/matrix.py\", line 12, in \nfrom . import cm\nFile \"/opt/venv/lib/python3.10/site-packages/seaborn/cm.py\", line 1582, in \nmpl_cm.register_cmap(_name, _cmap)\nAttributeError: module 'matplotlib.cm' has no attribute 'register_cmap'","shortMessageHtmlLink":"Updated matplotlib to 3.9.0 due to seaborn dependency issue"}},{"before":"f09969b85a49a861556cce4edd03bfa53d024f34","after":"d90d946d616fa9cafe3aab0b63c2368cbc13ef26","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-14T19:22:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"0.0.153 fix Dict typehint","shortMessageHtmlLink":"0.0.153 fix Dict typehint"}},{"before":"5bd2d1c280bfae9266c23775f39b6a939eba9cde","after":"f09969b85a49a861556cce4edd03bfa53d024f34","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-14T17:55:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Circular import fix attempt by merging files","shortMessageHtmlLink":"Circular import fix attempt by merging files"}},{"before":"61e1a5c129c015035e8866105af74119422bca5d","after":"5bd2d1c280bfae9266c23775f39b6a939eba9cde","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-14T16:05:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Fixed more circular imports","shortMessageHtmlLink":"Fixed more circular imports"}},{"before":"6ccbea182893b41de82bce892a2e7dfbe8f98c77","after":"61e1a5c129c015035e8866105af74119422bca5d","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-13T20:59:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Avoiding importing types as *\n\nAlso imported InferenceResults directly instead of indirectly through\nthe types .py file (which caused error)","shortMessageHtmlLink":"Avoiding importing types as *"}},{"before":"71a1f6c07c140656832883f91c1a02f76d2940a8","after":"6ccbea182893b41de82bce892a2e7dfbe8f98c77","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-13T19:21:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Added type aliases to complex datastructures","shortMessageHtmlLink":"Added type aliases to complex datastructures"}},{"before":"3d0375b6c5f34b3d3d9479ac6db964d7bea6070a","after":"71a1f6c07c140656832883f91c1a02f76d2940a8","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-11T20:07:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Fix types for no UMI","shortMessageHtmlLink":"Fix types for no UMI"}},{"before":"e57f05636bc17dedf9f934043ce2190cea6e6062","after":"3d0375b6c5f34b3d3d9479ac6db964d7bea6070a","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-06T18:54:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Fixed UMI regex empty check, fixed bug parsing UMI when not provided","shortMessageHtmlLink":"Fixed UMI regex empty check, fixed bug parsing UMI when not provided"}},{"before":"60ef329966d4627fb5858aca4b3ea64b6e53aa99","after":"e57f05636bc17dedf9f934043ce2190cea6e6062","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-06T18:29:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Updated seaborn version","shortMessageHtmlLink":"Updated seaborn version"}},{"before":"1570b78b30b42941604926d8291a41ebfd9cd8ce","after":"60ef329966d4627fb5858aca4b3ea64b6e53aa99","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-06T17:39:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Update dockerfile","shortMessageHtmlLink":"Update dockerfile"}},{"before":null,"after":"1570b78b30b42941604926d8291a41ebfd9cd8ce","ref":"refs/heads/no_umi_support","pushedAt":"2024-06-06T17:26:16.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Setting empty parsing regex to None","shortMessageHtmlLink":"Setting empty parsing regex to None"}},{"before":"250bafb4699777fb993da87b5935856fbf64c9b3","after":"8712538adc9fe16c01ccfbe46358e8114438cac2","ref":"refs/heads/master","pushedAt":"2024-01-29T22:40:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Handle NoneTypes for editing visualizations","shortMessageHtmlLink":"Handle NoneTypes for editing visualizations"}},{"before":"c1afb1311e4021513e4d02f988a02da28c6f6526","after":"250bafb4699777fb993da87b5935856fbf64c9b3","ref":"refs/heads/master","pushedAt":"2024-01-29T20:16:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Fix function to calc editing efficiency where there are no reads","shortMessageHtmlLink":"Fix function to calc editing efficiency where there are no reads"}},{"before":"9072bb5c65fbda63529f3bb9dfec0c4564b0de77","after":"c1afb1311e4021513e4d02f988a02da28c6f6526","ref":"refs/heads/master","pushedAt":"2024-01-29T13:56:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Fix","shortMessageHtmlLink":"Fix"}},{"before":"cc4663ac214c93021493c98bdf6323d98fa3b299","after":"9072bb5c65fbda63529f3bb9dfec0c4564b0de77","ref":"refs/heads/master","pushedAt":"2024-01-29T03:31:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Also fixed empty mutations in other editing processing functions","shortMessageHtmlLink":"Also fixed empty mutations in other editing processing functions"}},{"before":"ba6887e3b0cddea9d10768da92b9d0b2a87157e9","after":"cc4663ac214c93021493c98bdf6323d98fa3b299","ref":"refs/heads/master","pushedAt":"2024-01-29T02:55:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Corrected editing visualization bug when there are 0 reads/edits","shortMessageHtmlLink":"Corrected editing visualization bug when there are 0 reads/edits"}},{"before":"81c1f2ab960924578f8aac6a805dc4d4e85e7efd","after":"ba6887e3b0cddea9d10768da92b9d0b2a87157e9","ref":"refs/heads/master","pushedAt":"2024-01-22T20:14:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Fixed issue with saving Dataframe pickles (using is None, not ==)","shortMessageHtmlLink":"Fixed issue with saving Dataframe pickles (using is None, not ==)"}},{"before":"688fd8633230256773f542df65e74648ec1b1937","after":"81c1f2ab960924578f8aac6a805dc4d4e85e7efd","ref":"refs/heads/master","pushedAt":"2024-01-22T15:36:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Removed stray function call","shortMessageHtmlLink":"Removed stray function call"}},{"before":"91957d5466db6bdfab72550f7d5a178f1bcecf82","after":"688fd8633230256773f542df65e74648ec1b1937","ref":"refs/heads/master","pushedAt":"2024-01-22T01:03:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"CodingBash","name":"Basheer Becerra","path":"/CodingBash","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8675218?s=80&v=4"},"commit":{"message":"Fixed error with crispr_count_processing functional call","shortMessageHtmlLink":"Fixed error with crispr_count_processing functional call"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEugkcQwA","startCursor":null,"endCursor":null}},"title":"Activity ยท pinellolab/CRISPR-Correct"}