diff --git a/Datasets/Albert_et_al_2018/3_Combine_spectra_traits.R b/Datasets/Albert_et_al_2018/3_Combine_spectra_traits.R index 4ccc4c3a..7c258273 100644 --- a/Datasets/Albert_et_al_2018/3_Combine_spectra_traits.R +++ b/Datasets/Albert_et_al_2018/3_Combine_spectra_traits.R @@ -25,6 +25,7 @@ spectra=data.frame(SampleID=spectra$BR_UID, Vcmax25_JB=spectra$JB_VcmaxRef, Vqmax25_JB=spectra$JB_VqmaxRef, Tp25_JB=spectra$JB_TpRef, + Tleaf_ACi=spectra$Tleaf, Spectra=I(as.matrix(spectra[,11:2161]*100))) ## Reflectance in % (0 - 100) f.plot.spec(Z = spectra$Spectra,wv = 350:2500) diff --git a/Datasets/Albert_et_al_2018/3_Spectra_traits.Rdata b/Datasets/Albert_et_al_2018/3_Spectra_traits.Rdata index 020b899a..cc4e309f 100644 --- a/Datasets/Albert_et_al_2018/3_Spectra_traits.Rdata +++ b/Datasets/Albert_et_al_2018/3_Spectra_traits.Rdata @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:f6e947abe3682f9c7c45460c68e990e106e55c87e8cbd6e79853ab0bab6f28cd -size 631899 +oid sha256:6f9a0ad26acd516ded39eb27f04abfb92661c527c6a55e0e59f483de9f47f69a +size 632243 diff --git a/Datasets/Barnes_et_al_2017/3_Combine_spectra_traits.R b/Datasets/Barnes_et_al_2017/3_Combine_spectra_traits.R index 2c31c2a0..6c2db6ea 100644 --- a/Datasets/Barnes_et_al_2017/3_Combine_spectra_traits.R +++ b/Datasets/Barnes_et_al_2017/3_Combine_spectra_traits.R @@ -29,6 +29,7 @@ spectra=data.frame(SampleID=spectra$uniqueID, Vcmax25_JB=spectra$JB_VcmaxRef, Vqmax25_JB=spectra$JB_VqmaxRef, Tp25_JB=spectra$JB_TpRef, + Tleaf_ACi=spectra$Tleaf, Spectra=I(as.matrix(spectra[,10:2160]*100)))## Reflectance in % (0-100) f.plot.spec(Z = spectra$Spectra,wv = 350:2500) diff --git a/Datasets/Barnes_et_al_2017/3_Spectra_traits.Rdata b/Datasets/Barnes_et_al_2017/3_Spectra_traits.Rdata index 000cfb2b..67942af4 100644 --- a/Datasets/Barnes_et_al_2017/3_Spectra_traits.Rdata +++ b/Datasets/Barnes_et_al_2017/3_Spectra_traits.Rdata @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:ebb6a3de976c78f76f1478ddbeca84dfc4690e49646c1da39d662f6bbf7820cf -size 1379253 +oid sha256:dbbbc2874015a4ed0e091e610d6900064d9da78c7f99f915711b2a7a64479b51 +size 1379816 diff --git a/Datasets/Burnett_et_al_2021/3_Combine_spectra_traits.R b/Datasets/Burnett_et_al_2021/3_Combine_spectra_traits.R index 70c80e14..763edcc3 100644 --- a/Datasets/Burnett_et_al_2021/3_Combine_spectra_traits.R +++ b/Datasets/Burnett_et_al_2021/3_Combine_spectra_traits.R @@ -23,6 +23,7 @@ spectra=data.frame(SampleID=spectra$Sample_ID, Vcmax25_JB=spectra$JB_VcmaxRef, Vqmax25_JB=spectra$JB_VqmaxRef, Tp25_JB=spectra$JB_TpRef, + Tleaf_ACi=spectra$Tleaf, Spectra=I(as.matrix(spectra[,2:2152]*100))) ## Reflectance in % (0-100) library(spectratrait) f.plot.spec(Z = spectra$Spectra,wv = 350:2500) diff --git a/Datasets/Burnett_et_al_2021/3_Spectra_traits.Rdata b/Datasets/Burnett_et_al_2021/3_Spectra_traits.Rdata index fa364dd3..77ca1bd9 100644 --- a/Datasets/Burnett_et_al_2021/3_Spectra_traits.Rdata +++ b/Datasets/Burnett_et_al_2021/3_Spectra_traits.Rdata @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:2ae31b0d63ad8e15dc3fde23cbb973538201a2a75f432b31ca5689f8a16135c9 -size 418752 +oid sha256:4a866c2fa6bee9c5bd71ce33990af20dad9dc0312e3a941f8e98eba4b31ae1c0 +size 419040 diff --git a/Datasets/Lamour_et_al_2021/3_Combine_spectra_traits.R b/Datasets/Lamour_et_al_2021/3_Combine_spectra_traits.R index 5445e484..353b8e21 100644 --- a/Datasets/Lamour_et_al_2021/3_Combine_spectra_traits.R +++ b/Datasets/Lamour_et_al_2021/3_Combine_spectra_traits.R @@ -23,6 +23,7 @@ spectra=data.frame(SampleID=spectra$SampleID, Vcmax25_JB=spectra$JB_VcmaxRef, Vqmax25_JB=spectra$JB_VqmaxRef, Tp25_JB=spectra$JB_TpRef, + Tleaf_ACi=spectra$Tleaf, Spectra=I(as.matrix(spectra[,19:2169])))## Reflectance in % (0-100) f.plot.spec(Z = spectra$Spectra,wv = 350:2500) diff --git a/Datasets/Lamour_et_al_2021/3_Spectra_traits.Rdata b/Datasets/Lamour_et_al_2021/3_Spectra_traits.Rdata index 597fc4b4..50d1444c 100644 --- a/Datasets/Lamour_et_al_2021/3_Spectra_traits.Rdata +++ b/Datasets/Lamour_et_al_2021/3_Spectra_traits.Rdata @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:b1172a1e0692e1d8c6e20e2e70601d21925772b9065411e8dbe1a1a58e8cec2c -size 1116347 +oid sha256:1662459d29adce23199fb764f01837eb21f748dd7a8088e63d4525ebc40c80d7 +size 1116864 diff --git a/Datasets/Rogers_et_al_2017/3_Combine_spectra_traits.R b/Datasets/Rogers_et_al_2017/3_Combine_spectra_traits.R index 4d61079a..22745433 100644 --- a/Datasets/Rogers_et_al_2017/3_Combine_spectra_traits.R +++ b/Datasets/Rogers_et_al_2017/3_Combine_spectra_traits.R @@ -32,6 +32,7 @@ spectra=data.frame(SampleID=spectra$SampleID, Vcmax25_JB=spectra$JB_VcmaxRef, Vqmax25_JB=spectra$JB_VqmaxRef, Tp25_JB=spectra$JB_TpRef, + Tleaf_ACi=spectra$Tleaf, Spectra=I(as.matrix(spectra[,36:2186])))## Reflectance in % (0-100) f.plot.spec(Z = spectra$Spectra,wv = 350:2500) diff --git a/Datasets/Rogers_et_al_2017/3_Spectra_traits.Rdata b/Datasets/Rogers_et_al_2017/3_Spectra_traits.Rdata index fc0dc57d..2d728b34 100644 --- a/Datasets/Rogers_et_al_2017/3_Spectra_traits.Rdata +++ b/Datasets/Rogers_et_al_2017/3_Spectra_traits.Rdata @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:8ea6c212ddb0edcfa5ac35312d748bc84cf11191b0154555619af010707f92f3 -size 863384 +oid sha256:1e3ceac3b383260fb15f14e3eaf8025163a50a538e7484a5b22c92139e787a57 +size 863640 diff --git a/Datasets/Rogers_et_al_2020/3_Combine_spectra_traits.R b/Datasets/Rogers_et_al_2020/3_Combine_spectra_traits.R index 7c23b4f7..310a7593 100644 --- a/Datasets/Rogers_et_al_2020/3_Combine_spectra_traits.R +++ b/Datasets/Rogers_et_al_2020/3_Combine_spectra_traits.R @@ -32,6 +32,7 @@ spectra=data.frame(SampleID=spectra$SampleID, Vcmax25_JB=spectra$JB_VcmaxRef, Vqmax25_JB=spectra$JB_VqmaxRef, Tp25_JB=spectra$JB_TpRef, + Tleaf_ACi=spectra$Tleaf, Spectra=I(as.matrix(spectra[,32:2182])))## Reflectance in % (0-100) f.plot.spec(Z = spectra$Spectra,wv = 350:2500) diff --git a/Datasets/Rogers_et_al_2020/3_Spectra_traits.Rdata b/Datasets/Rogers_et_al_2020/3_Spectra_traits.Rdata index e07070db..1430c4de 100644 --- a/Datasets/Rogers_et_al_2020/3_Spectra_traits.Rdata +++ b/Datasets/Rogers_et_al_2020/3_Spectra_traits.Rdata @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:dc6bd80015e4be09232dbe82499e30b95d981d6fe92a6510aadaa7e083ad54b4 -size 266609 +oid sha256:8551cabbb0b4543848cb746b73e82c9ecc48cd0bb18c7441e5745f88ea5e0ce0 +size 266828 diff --git a/Datasets/Wu_et_al_2019/3_Combine_spectra_traits.R b/Datasets/Wu_et_al_2019/3_Combine_spectra_traits.R index 43e604ec..21bb6f5e 100644 --- a/Datasets/Wu_et_al_2019/3_Combine_spectra_traits.R +++ b/Datasets/Wu_et_al_2019/3_Combine_spectra_traits.R @@ -21,6 +21,7 @@ spectra=data.frame(SampleID=spectra$BNL_UID, Vcmax25_JB=spectra$JB_VcmaxRef, Vqmax25_JB=spectra$JB_VqmaxRef, Tp25_JB=spectra$JB_TpRef, + Tleaf_ACi=spectra$Tleaf, Spectra=I(as.matrix(spectra[,11:2161]*100))) ## Reflectance in % (0-100) f.plot.spec(Z = spectra$Spectra,wv = 350:2500) diff --git a/Datasets/Wu_et_al_2019/3_Spectra_traits.Rdata b/Datasets/Wu_et_al_2019/3_Spectra_traits.Rdata index fe2a62d9..eebcab63 100644 --- a/Datasets/Wu_et_al_2019/3_Spectra_traits.Rdata +++ b/Datasets/Wu_et_al_2019/3_Spectra_traits.Rdata @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:bd521dbab2802987629150eb4e71b28569f7b695acd457c9d859fbc4798c4888 -size 1365216 +oid sha256:a2f137818fa8664588df89cfa14bbc55a5c621a20177fa8b66de2b83b4eabcca +size 1366264 diff --git a/Datasets/Yan_et_al_2021/3_Combine_spectra_traits.R b/Datasets/Yan_et_al_2021/3_Combine_spectra_traits.R index 5bb973cd..bd293c12 100644 --- a/Datasets/Yan_et_al_2021/3_Combine_spectra_traits.R +++ b/Datasets/Yan_et_al_2021/3_Combine_spectra_traits.R @@ -21,6 +21,7 @@ spectra=data.frame(SampleID=spectra$SampleID, Vcmax25_JB=spectra$JB_VcmaxRef, Vqmax25_JB=spectra$JB_VqmaxRef, Tp25_JB=spectra$JB_TpRef, + Tleaf_ACi=spectra$Tleaf, Spectra=I(as.matrix(cbind(matrix(data = NA,nrow = nrow(spectra),ncol = 50),spectra[,10:2110])))) ## Reflectance in % (0-100) f.plot.spec(Z = spectra$Spectra,wv = 350:2500) diff --git a/Datasets/Yan_et_al_2021/3_Spectra_traits.Rdata b/Datasets/Yan_et_al_2021/3_Spectra_traits.Rdata index b8fd79be..20049093 100644 --- a/Datasets/Yan_et_al_2021/3_Spectra_traits.Rdata +++ b/Datasets/Yan_et_al_2021/3_Spectra_traits.Rdata @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:7936de4095c314a2624f667087faf206015c26cd98375f4d2db6e6753bdab0d7 -size 1739142 +oid sha256:88120d7847ff51543b216e033e684a8e9da6f61550a97809135c66410c835c7e +size 1741216