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A library to read, manipulate and write various genetic sequencing formats.

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genereader

A library to read, manipulate and write various genetic sequencing formats.

About

Genereader provides a universal interface for reading, manipulating and writing various genetic sequencing formats for use in Plasmid Designer and similar bioinformatics applications.

Intended use-case

  1. Read genetic sequences and associated metadata from a file
  2. Manipulate the contents of the file using a high-level interface
  3. Write the modified data back to disk

Roadmap

Format Read Write
FASTA TODO
FASTQ TODO
GB (GenBank) TODO
SAM TODO TODO

Contributing

Contributions are welcome! Please open an issue or pull request if you have any suggestions or bug reports.

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A library to read, manipulate and write various genetic sequencing formats.

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