ProtoCaller 1.1.0
- Now compatible with BioSimSpace 2019.2.0
- Can now grow out dummy bonds
- Completely overhauled the Simulation library. Now all GROMACS simulations are done through the Run_GMX class.
- All print statements are now redirected to a logger instead
- Automatic conversion of nonstandard amino acids to standard ones using PDBFixer
- Various API changes and small bug fixes