PyBEL Tools

PyBEL Tools is a suite of tools built on top of PyBEL to facilitate data management, integration, and analysis. For examples, see the PyBEL Notebooks repository.

Citation

If you find PyBEL useful for your work, please consider citing:

[1]	Hoyt, C. T., et al. (2017). PyBEL: a Computational Framework for Biological Expression Language. Bioinformatics, 34(December), 1–2.

Installation

PyBEL Tools can be installed easily from PyPI_ with the following code in your favorite terminal:

$ pip install pybel_tools

or from the latest code on GitHub with:

$ pip install git+https://github.com/pybel/pybel-tools.git

See the installation documentation for more advanced instructions.

Documentation and Examples

• Documentation at https://pybel-tools.readthedocs.io
• Cookbook at https://github.com/pybel/pybel-notebooks

Acknowledgements

This package was originally developed as part of the master's work of Charles Tapley Hoyt at Fraunhofer SCAI.