You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
setting scale_bar=True to plot() method fails in some instances. In the below case, we tried plotting a (256,512) image dataset with the scale bar, and it throws the following error:
---------------------------------------------------------------------------
ValueError Traceback (most recent call last)
File ~/anaconda3/lib/python3.11/site-packages/IPython/core/formatters.py:340, in BaseFormatter.__call__(self, obj)
338 pass
339 else:
--> 340 return printer(obj)
341 # Finally look for special method names
342 method = get_real_method(obj, self.print_method)
File ~/anaconda3/lib/python3.11/site-packages/IPython/core/pylabtools.py:152, in print_figure(fig, fmt, bbox_inches, base64, **kwargs)
149 from matplotlib.backend_bases import FigureCanvasBase
150 FigureCanvasBase(fig)
--> 152 fig.canvas.print_figure(bytes_io, **kw)
153 data = bytes_io.getvalue()
154 if fmt == 'svg':
File ~/anaconda3/lib/python3.11/site-packages/matplotlib/backend_bases.py:2366, in FigureCanvasBase.print_figure(self, filename, dpi, facecolor, edgecolor, orientation, format, bbox_inches, pad_inches, bbox_extra_artists, backend, **kwargs)
2362 try:
2363 # _get_renderer may change the figure dpi (as vector formats
2364 # force the figure dpi to 72), so we need to set it again here.
2365 with cbook._setattr_cm(self.figure, dpi=dpi):
-> 2366 result = print_method(
2367 filename,
2368 facecolor=facecolor,
2369 edgecolor=edgecolor,
2370 orientation=orientation,
2371 bbox_inches_restore=_bbox_inches_restore,
2372 **kwargs)
2373 finally:
2374 if bbox_inches and restore_bbox:
File ~/anaconda3/lib/python3.11/site-packages/matplotlib/backend_bases.py:2232, in FigureCanvasBase._switch_canvas_and_return_print_method.<locals>.<lambda>(*args, **kwargs)
2228 optional_kws = { # Passed by print_figure for other renderers.
2229 "dpi", "facecolor", "edgecolor", "orientation",
2230 "bbox_inches_restore"}
2231 skip = optional_kws - {*inspect.signature(meth).parameters}
-> 2232 print_method = functools.wraps(meth)(lambda *args, **kwargs: meth(
2233 *args, **{k: v for k, v in kwargs.items() if k not in skip}))
2234 else: # Let third-parties do as they see fit.
2235 print_method = meth
File ~/anaconda3/lib/python3.11/site-packages/matplotlib/backends/backend_agg.py:509, in FigureCanvasAgg.print_png(self, filename_or_obj, metadata, pil_kwargs)
462 def print_png(self, filename_or_obj, *, metadata=None, pil_kwargs=None):
463 """
464 Write the figure to a PNG file.
465
(...)
507 *metadata*, including the default 'Software' key.
508 """
--> 509 self._print_pil(filename_or_obj, "png", pil_kwargs, metadata)
File ~/anaconda3/lib/python3.11/site-packages/matplotlib/backends/backend_agg.py:457, in FigureCanvasAgg._print_pil(self, filename_or_obj, fmt, pil_kwargs, metadata)
452 def _print_pil(self, filename_or_obj, fmt, pil_kwargs, metadata=None):
453 """
454 Draw the canvas, then save it using `.image.imsave` (to which
455 *pil_kwargs* and *metadata* are forwarded).
456 """
--> 457 FigureCanvasAgg.draw(self)
458 mpl.image.imsave(
459 filename_or_obj, self.buffer_rgba(), format=fmt, origin="upper",
460 dpi=self.figure.dpi, metadata=metadata, pil_kwargs=pil_kwargs)
File ~/anaconda3/lib/python3.11/site-packages/matplotlib/backends/backend_agg.py:394, in FigureCanvasAgg.draw(self)
392 def draw(self):
393 # docstring inherited
--> 394 self.renderer = self.get_renderer()
395 self.renderer.clear()
396 # Acquire a lock on the shared font cache.
File ~/anaconda3/lib/python3.11/site-packages/matplotlib/_api/deprecation.py:384, in delete_parameter.<locals>.wrapper(*inner_args, **inner_kwargs)
379 @functools.wraps(func)
380 def wrapper(*inner_args, **inner_kwargs):
381 if len(inner_args) <= name_idx and name not in inner_kwargs:
382 # Early return in the simple, non-deprecated case (much faster than
383 # calling bind()).
--> 384 return func(*inner_args, **inner_kwargs)
385 arguments = signature.bind(*inner_args, **inner_kwargs).arguments
386 if is_varargs and arguments.get(name):
File ~/anaconda3/lib/python3.11/site-packages/matplotlib/backends/backend_agg.py:411, in FigureCanvasAgg.get_renderer(self, cleared)
409 reuse_renderer = (self._lastKey == key)
410 if not reuse_renderer:
--> 411 self.renderer = RendererAgg(w, h, self.figure.dpi)
412 self._lastKey = key
413 elif cleared:
File ~/anaconda3/lib/python3.11/site-packages/matplotlib/backends/backend_agg.py:84, in RendererAgg.__init__(self, width, height, dpi)
82 self.width = width
83 self.height = height
---> 84 self._renderer = _RendererAgg(int(width), int(height), dpi)
85 self._filter_renderers = []
87 self._update_methods()
ValueError: Image size of 92837179x18567491 pixels is too large. It must be less than 2^16 in each direction.
<Figure size 640x480 with 2 Axes>
The text was updated successfully, but these errors were encountered:
setting scale_bar=True to plot() method fails in some instances. In the below case, we tried plotting a (256,512) image dataset with the scale bar, and it throws the following error:
The text was updated successfully, but these errors were encountered: