trying to reinstate M1 for macos #93

	name: Code coverage

	on: [pull_request]

	env:
	BUILD_FOLDER: build
	EXAMPLES_FOLDER: examples

	jobs:
	build:
	strategy:
	matrix:
	include:
	- os: ubuntu-latest
	label: linux-64
	prefix: /usr/share/miniconda3/envs/biorbd_eigen
	name: ${{ matrix.label }}
	runs-on: ${{ matrix.os }}
	defaults:
	run:
	shell: bash -l {0}
	steps:
	- uses: actions/checkout@v2

	- name: Get number of CPU cores
	uses: SimenB/github-actions-cpu-cores@v1
	id: cpu-cores

	- name: Setup environment
	uses: conda-incubator/setup-miniconda@v2
	with:
	miniforge-variant: Mambaforge
	miniforge-version: latest
	use-mamba: true
	activate-environment: ezc3d
	environment-file: environment.yml

	- name: Print mamba info
	run: \|
	mamba info
	mamba list

	- name: Install code coverage dependencies
	run: \|
	mamba install cmake git pkgconfig codecov lcov -cconda-forge
	mamba list
	git submodule update --init --recursive

	- name: Perform code coverage
	run: \|
	MAIN_FOLDER=`pwd`
	CONDA_ENV_PATH=$CONDA/envs/ezc3d
	mkdir -p $BUILD_FOLDER
	cd $BUILD_FOLDER
	cmake -DCMAKE_INSTALL_PREFIX=$CONDA_ENV_PATH -DCMAKE_BUILD_TYPE=Coverage -DBUILD_TESTS=ON -DBUILD_EXAMPLE=OFF -DBUILD_DOC=OFF -DUSE_MATRIX_FAST_ACCESSOR=OFF -DBINDER_PYTHON3=OFF ..
	make ezc3d_coverage -j${{ steps.cpu-cores.outputs.count }}
	lcov --directory . --capture --output-file coverage.info
	lcov --remove coverage.info '/usr/*' --output-file coverage.info
	lcov --list coverage.info
	bash <(curl -s https://codecov.io/bash) \|\| echo "Codecov did not collect coverage reports"
	cd $MAIN_FOLDER

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