-
Notifications
You must be signed in to change notification settings - Fork 0
/
swisstree_speciestree.nhx
1 lines (1 loc) · 12.9 KB
/
swisstree_speciestree.nhx
1
((((((((((((((((((((((((((((((HUMAN__Homo_sapiens__9606[&&NHX:C=255.0.102],PANTR__Pan_troglodytes__9598[&&NHX:C=255.0.102])1[&&NHX:B=70.0:C=255.0.102],GORGO__Gorilla_gorilla__9595[&&NHX:C=255.0.102])2[&&NHX:S=Homininae:B=90.0:C=255.0.102],PONAB__Pongo_abelii__9601[&&NHX:C=255.0.102])3[&&NHX:S=Hominidae:B=90.0:C=255.0.102],NOMLE__Nomascus_leucogenys__61853[&&NHX:C=255.0.102])4[&&NHX:S=Hominoidea:B=70.0:C=255.0.102],MACMU__Macaca_mulatta__9544[&&NHX:C=255.0.102])5[&&NHX:S=Catarrhini:B=90.0:C=255.0.102],CALJA__Callithrix_jacchus__9483[&&NHX:C=255.0.102])6[&&NHX:S=Simiiformes:B=90.0:C=255.0.102],OTOGA__Otolemur_garnettii__30611[&&NHX:C=255.0.102])7[&&NHX:S=Primates:B=90.0:C=255.0.102],((((MOUSE__Mus_musculus__10090[&&NHX:C=255.0.102],RAT__Rattus_norvegicus__10116[&&NHX:C=255.0.102])8[&&NHX:S=Murinae:B=90.0:C=255.0.102],CAVPO__Cavia_porcellus__10141[&&NHX:C=255.0.102])9[&&NHX:B=10.0:C=255.0.102],SPETR__Spermophilus_tridecemlineatus__43179[&&NHX:C=255.0.102])10[&&NHX:S=Rodentia:B=90.0:C=255.0.102],RABIT__Oryctolagus_cuniculus__9986[&&NHX:C=255.0.102])11[&&NHX:S=Glires:B=90.0:C=255.0.102])12[&&NHX:S=Euarchontoglires:B=90.0:C=255.0.102],((((BOVIN__Bos_taurus__9913[&&NHX:C=255.0.102],PIG__Sus_scrofa__9823[&&NHX:C=255.0.102])13[&&NHX:S=Cetartiodactyla:B=90.0:C=255.0.102],HORSE__Equus_caballus__9796[&&NHX:C=255.0.102])14[&&NHX:B=50.0:C=255.0.102],(CANFA__Canis_familiaris__9615[&&NHX:C=255.0.102],AILME__Ailuropoda_melanoleuca__9646[&&NHX:C=255.0.102])15[&&NHX:S=Caniformia:B=70.0:C=255.0.102])16[&&NHX:B=10.0:C=255.0.102],MYOLU__Myotis_lucifugus__59463[&&NHX:C=255.0.102])17[&&NHX:S=Laurasiatheria:B=90.0:C=255.0.102])18[&&NHX:S=Boreoeutheria:B=90.0:C=255.0.102],LOXAF__Loxodonta_africana__9785[&&NHX:C=255.0.102])19[&&NHX:S=Eutheria:B=90.0:C=255.0.102],(MONDO__Monodelphis_domestica__13616[&&NHX:C=255.0.102],SARHA__Sarcophilus_harrisii__9305[&&NHX:C=255.0.102])20[&&NHX:S=Metatheria:B=70.0:C=255.0.102])21[&&NHX:S=Theria:B=90.0:C=255.0.102],ORNAN__Ornithorhynchus_anatinus__9258[&&NHX:C=255.0.102])22[&&NHX:S=Mammalia:B=90.0:C=255.0.102],(((CHICK__Gallus_gallus__9031[&&NHX:C=255.0.102],MELGA__Meleagris_gallopavo__9103[&&NHX:C=255.0.102])23[&&NHX:S=Phasianidae:B=70.0:C=255.0.102],TAEGU__Taeniopygia_guttata__59729[&&NHX:C=255.0.102])24[&&NHX:S=Neognathae:B=90.0:C=255.0.102],ANOCA__Anolis_carolinensis__28377[&&NHX:C=255.0.102])25[&&NHX:S=Sauria:B=90.0:C=255.0.102])26[&&NHX:S=Amniota:B=90.0:C=255.0.102],XENTR__Xenopus_tropicalis__8364[&&NHX:C=255.0.102])27[&&NHX:S=Tetrapoda:B=90.0:C=255.0.102],LATCH__Latimeria_chalumnae__7897[&&NHX:C=255.0.102])28[&&NHX:S=Sarcopterygii:B=70.0:C=255.0.102],((((TAKRU__Takifugu_rubripes__31033[&&NHX:C=255.0.102],TETNG__Tetraodon_nigroviridis__99883[&&NHX:C=255.0.102])29[&&NHX:S=Tetraodontidae:B=90.0:C=255.0.102],GASAC__Gasterosteus_aculeatus__69293[&&NHX:C=255.0.102])30[&&NHX:S=Percomorpharia:B=70.0:C=255.0.102],(ORENI__Oreochromis_niloticus__8128[&&NHX:C=255.0.102],ORYLA__Oryzias_latipes__8090[&&NHX:C=255.0.102])31[&&NHX:S=Ovalentaria:B=70.0:C=255.0.102])32[&&NHX:S=Percomorphaceae:B=90.0:C=255.0.102],DANRE__Danio_rerio__7955[&&NHX:C=255.0.102])33[&&NHX:S=Clupeocephala:B=90.0:C=255.0.102])34[&&NHX:S=Vertebrata:B=90.0:C=255.0.102],(CIOIN__Ciona_intestinalis__7719[&&NHX:C=0.204.204],CIOSA__Ciona_savignyi__51511[&&NHX:C=0.204.204])35[&&NHX:S=Ciona:B=90.0:C=0.204.204])36[&&NHX:B=50.0:C=0.204.204],BRAFL__Branchiostoma_floridae__7739[&&NHX:C=0.204.204])37[&&NHX:S=Chordata:B=70.0:C=0.204.204],STRPU__Strongylocentrotus_purpuratus__7668[&&NHX:C=0.204.204])38[&&NHX:S=Deuterostomia:B=70.0:C=0.204.204],((((((((((ANOGA__Anopheles_gambiae__7165[&&NHX:C=255.0.204],ANODA__Anopheles_darlingi__43151[&&NHX:C=255.0.204])39[&&NHX:S=Anopheles:B=70.0:C=255.0.204],AEDAE__Aedes_aegypti__7159[&&NHX:C=255.0.204])40[&&NHX:S=Culicidae:B=90.0:C=255.0.204],(DROME__Drosophila_melanogaster__7227[&&NHX:C=255.0.204],DROPS__Drosophila_pseudoobscura__46245[&&NHX:C=255.0.204])41[&&NHX:S=Sophophora:B=90.0:C=255.0.204])42[&&NHX:S=Diptera:B=90.0:C=255.0.204],BOMMO__Bombyx_mori__7091[&&NHX:C=255.0.204])43[&&NHX:S=Diptera_Lepidoptera:B=90.0:C=255.0.204],(APIME__Apis_mellifera__7460[&&NHX:C=255.0.204],ATTCE__Atta_cephalotes__12957[&&NHX:C=255.0.204])44[&&NHX:S=Aculeata:B=70.0:C=255.0.204])45[&&NHX:S=Endopterygota:B=70.0:C=255.0.204],PEDHC__Pediculus_humanus__121224[&&NHX:C=255.0.204])46[&&NHX:B=90.0:C=255.0.204],DAPPU__Daphnia_pulex__6669[&&NHX:C=255.0.204])47[&&NHX:B=90.0:C=255.0.204],IXOSC__Ixodes_scapularis__6945[&&NHX:C=255.0.204])48[&&NHX:S=Arthropoda:B=70.0:C=255.0.204],(((CAEEL__Caenorhabditis_elegans__6239[&&NHX:C=255.0.204],CAEBR__Caenorhabditis_briggsae__6238[&&NHX:C=255.0.204])49[&&NHX:B=90.0:C=255.0.204],CAEJA__Caenorhabditis_japonica__281687[&&NHX:C=255.0.204])50[&&NHX:S=Caenorhabditis:B=70.0:C=255.0.204],PRIPA__Pristionchus_pacificus__54126[&&NHX:C=255.0.204])51[&&NHX:S=Chromadorea:B=70.0:C=255.0.204])52[&&NHX:S=Ecdysozoa:B=90.0:C=255.0.204],SCHMA__Schistosoma_mansoni__6183[&&NHX:C=255.0.204])53[&&NHX:B=10.0:C=255.0.204])54[&&NHX:S=Bilateria:B=90.0:C=255.0.204],NEMVE__Nematostella_vectensis__45351[&&NHX:C=0.0.255])55[&&NHX:S=Eumetazoa:B=90.0:C=0.0.255],TRIAD__Trichoplax_adhaerens__10228[&&NHX:C=0.0.255])56[&&NHX:B=10.0:C=0.0.255],AMPQE__Amphimedon_queenslandica__400682[&&NHX:C=0.0.255])57[&&NHX:S=Metazoa:B=10.0:C=0.0.255],MONBE__Monosiga_brevicollis__81824[&&NHX:C=153.153.153])58[&&NHX:B=90.0:C=153.153.153],((((((((((NEUCR__Neurospora_crassa__367110[&&NHX:C=0.255.255],(GIBZE__Gibberella_zeae__229533[&&NHX:C=0.255.255],NECH7__Nectria_haematococca__660122[&&NHX:C=0.255.255])59[&&NHX:S=Fusarium:B=90.0:C=0.255.255])60[&&NHX:S=Sordariomycetes:B=90.0:C=0.255.255],SCLS1__Sclerotinia_sclerotiorum__665079[&&NHX:C=0.255.255])61[&&NHX:S=sordariomyceta:B=90.0:C=0.255.255],(((EMENI__Emericella_nidulans__227321[&&NHX:C=0.255.255],ASPFU__Neosartorya_fumigata__330879[&&NHX:C=0.255.255])62[&&NHX:S=Aspergillus:B=90.0:C=0.255.255],(AJECG__Ajellomyces_capsulata__447093[&&NHX:C=0.255.255],COCIM__Coccidioides_immitis__246410[&&NHX:C=0.255.255])63[&&NHX:S=Onygenales:B=90.0:C=0.255.255])64[&&NHX:S=Eurotiomycetidae:B=90.0:C=0.255.255],PHANO__Phaeosphaeria_nodorum__321614[&&NHX:C=0.255.255])65[&&NHX:B=10.0:C=0.255.255])66[&&NHX:S=leotiomyceta:B=70.0:C=0.255.255],TUBMM__Tuber_melanosporum__656061[&&NHX:C=0.255.255])67[&&NHX:S=Pezizomycotina:B=70.0:C=0.255.255],(((YEAST__Saccharomyces_cerevisiae__559292[&&NHX:C=0.255.255],ASHGO__Ashbya_gossypii__284811[&&NHX:C=0.255.255])68[&&NHX:S=Saccharomycetaceae:B=70.0:C=0.255.255],CANAL__Candida_albicans__237561[&&NHX:C=0.255.255])69[&&NHX:B=70.0:C=0.255.255],YARLI__Yarrowia_lipolytica__284591[&&NHX:C=0.255.255])70[&&NHX:S=Saccharomycetales:B=70.0:C=0.255.255])71[&&NHX:S=Saccharomyceta:B=90.0:C=0.255.255],SCHPO__Schizosaccharomyces_pombe__284812[&&NHX:C=0.255.255])72[&&NHX:S=Ascomycota:B=90.0:C=0.255.255],(((CRYNJ__Cryptococcus_neoformans__214684[&&NHX:C=0.255.255],COPC7__Coprinopsis_cinerea__240176[&&NHX:C=0.255.255])73[&&NHX:S=Agaricomycotina:B=90.0:C=0.255.255],PUCGT__Puccinia_graminis__418459[&&NHX:C=0.255.255])74[&&NHX:B=10.0:C=0.255.255],USTMA__Ustilago_maydis__237631[&&NHX:C=0.255.255])75[&&NHX:S=Basidiomycota:B=90.0:C=0.255.255])76[&&NHX:S=Dikarya:B=70.0:C=0.255.255],RHIO9__Rhizopus_delemar__246409[&&NHX:C=0.255.255])77[&&NHX:B=10.0:C=0.255.255],BATDJ__Batrachochytrium_dendrobatidis__684364[&&NHX:C=0.255.255])78[&&NHX:B=10.0:C=0.255.255],ENCCU__Encephalitozoon_cuniculi__284813[&&NHX:C=0.255.255])79[&&NHX:S=Fungi:B=90.0:C=0.255.255])80[&&NHX:S=Opisthokonta:B=90.0:C=0.255.255],(((DICDI__Dictyostelium_discoideum__44689[&&NHX:C=51.153.255],DICPU__Dictyostelium_purpureum__5786[&&NHX:C=51.153.255])81[&&NHX:S=Dictyostelium:B=90.0:C=51.153.255],POLPA__Polysphondylium_pallidum__13642[&&NHX:C=51.153.255])82[&&NHX:S=Dictyosteliida:B=70.0:C=51.153.255],ENTHI__Entamoeba_histolytica__5759[&&NHX:C=51.153.255])83[&&NHX:S=Amoebozoa:B=50.0:C=51.153.255])84[&&NHX:S=Unikonta:B=90.0:C=51.153.255],(((((((ARATH__Arabidopsis_thaliana__3702[&&NHX:C=0.255.0],(POPTR__Populus_trichocarpa__3694[&&NHX:C=0.255.0],SOYBN__Glycine_max__3847[&&NHX:C=0.255.0])85[&&NHX:S=fabids:B=10.0:C=0.255.0])86[&&NHX:B=10.0:C=0.255.0],VITVI__Vitis_vinifera__29760[&&NHX:C=0.255.0])87[&&NHX:S=rosids:B=10.0:C=0.255.0],(SOLLC__Solanum_lycopersicum__4081[&&NHX:C=0.255.0],SOLTU__Solanum_tuberosum__4113[&&NHX:C=0.255.0])88[&&NHX:S=Solanum:B=90.0:C=0.255.0])89[&&NHX:S=Pentapetalae:B=90.0:C=0.255.0],((ORYSJ__Oryza_sativa__39947[&&NHX:C=0.255.0],BRADI__Brachypodium_distachyon__15368[&&NHX:C=0.255.0])90[&&NHX:S=BEPclade:B=90.0:C=0.255.0],SORBI__Sorghum_bicolor__4558[&&NHX:C=0.255.0])91[&&NHX:S=Poaceae:B=90.0:C=0.255.0])92[&&NHX:S=Mesangiospermae:B=90.0:C=0.255.0],PHYPA__Physcomitrella_patens__3218[&&NHX:C=0.255.0])93[&&NHX:S=Embryophyta:B=90.0:C=0.255.0],CHLRE__Chlamydomonas_reinhardtii__3055[&&NHX:C=0.255.0])94[&&NHX:S=Viridiplantae:B=90.0:C=0.255.0],((((((PLACH__Plasmodium_chabaudi__5825[&&NHX:C=255.102.0],(PLABA__Plasmodium_berghei__5823[&&NHX:C=255.102.0],PLAYO__Plasmodium_yoelii__73239[&&NHX:C=255.102.0])95[&&NHX:B=70.0:C=255.102.0])96[&&NHX:B=90.0:C=255.102.0],((PLAKH__Plasmodium_knowlesi__5851[&&NHX:C=255.102.0],PLAVS__Plasmodium_vivax__126793[&&NHX:C=255.102.0])97[&&NHX:B=90.0:C=255.102.0],PLAF7__Plasmodium_falciparum__36329[&&NHX:C=255.102.0])98[&&NHX:B=70.0:C=255.102.0])99[&&NHX:S=Plasmodium:B=90.0:C=255.102.0],(BABBO__Babesia_bovis__5865[&&NHX:C=255.102.0],(THEAN__Theileria_annulata__5874[&&NHX:C=255.102.0],THEPA__Theileria_parva__5875[&&NHX:C=255.102.0])100[&&NHX:S=Theileria:B=90.0:C=255.102.0])101[&&NHX:S=Piroplasmida:B=90.0:C=255.102.0])102[&&NHX:S=Aconoidasida:B=90.0:C=255.102.0],(TOXGO__Toxoplasma_gondii__5811[&&NHX:C=255.102.0],CRYHO__Cryptosporidium_hominis__237895[&&NHX:C=255.102.0])103[&&NHX:S=Eimeriorina:B=90.0:C=255.102.0])104[&&NHX:S=Apicomplexa:B=90.0:C=255.102.0],(TETTS__Tetrahymena_thermophila__312017[&&NHX:C=255.102.0],PARTE__Paramecium_tetraurelia__5888[&&NHX:C=255.102.0])105[&&NHX:S=Oligohymenophorea:B=90.0:C=255.102.0])106[&&NHX:S=Alveolata:B=90.0:C=255.102.0],((PHYIT__Phytophthora_infestans__403677[&&NHX:C=255.102.0],PHYRM__Phytophthora_ramorum__164328[&&NHX:C=255.102.0])107[&&NHX:S=Phytophthora:B=90.0:C=255.102.0],(THAPS__Thalassiosira_pseudonana__35128[&&NHX:C=255.102.0],PHATC__Phaeodactylum_tricornutum__556484[&&NHX:C=255.102.0])108[&&NHX:S=Bacillariophyta:B=90.0:C=255.102.0])109[&&NHX:S=stramenopiles:B=90.0:C=255.102.0])110[&&NHX:S=Halvaria:B=10.0:C=255.102.0])111[&&NHX:S=AH/SAR:B=10.0:C=255.102.0])112[&&NHX:S=Neozoa:B=50.0:C=255.102.0],(((TRYB2__Trypanosoma_brucei_brucei__999953[&&NHX:C=255.153.0],TRYCR__Trypanosoma_cruzi__5693[&&NHX:C=255.153.0])113[&&NHX:S=Trypanosoma:B=90.0:C=255.153.0],((LEIMA__Leishmania_major__5664[&&NHX:C=255.153.0],LEIIN__Leishmania_infantum__5671[&&NHX:C=255.153.0])114[&&NHX:B=90.0:C=255.153.0],LEIBR__Leishmania_braziliensis__5660[&&NHX:C=255.153.0])115[&&NHX:S=Leishmania:B=90.0:C=255.153.0])116[&&NHX:S=Trypanosomatidae:B=90.0:C=255.153.0],(TRIVA__Trichomonas_vaginalis__5722[&&NHX:C=255.153.0],GIAIC__Giardia_intestinalis__184922[&&NHX:C=255.153.0])117[&&NHX:B=70.0:C=255.153.0])118[&&NHX:S=Excavata:B=30.0:C=255.153.0])119[&&NHX:S=Eukaryota:B=90.0:C=204.204.0],(((THEKO__Thermococcus_kodakaraensis__69014[&&NHX:C=255.0.255],METAC__Methanosarcina_acetivorans__188937[&&NHX:C=255.0.255],METJA__Methanocaldococcus_jannaschii__243232[&&NHX:C=255.0.255],HALSA__Halobacterium_salinarum__64091[&&NHX:C=255.0.255])120[&&NHX:S=Euryarchaeota:B=50.0:C=255.0.255],(PYRAE__Pyrobaculum_aerophilum__178306[&&NHX:C=255.0.255],SULSO__Sulfolobus_solfataricus__273057[&&NHX:C=255.0.255])121[&&NHX:S=Thermoprotei:B=90.0:C=255.0.255])122[&&NHX:B=90.0:C=255.0.255],KORCO__Korarchaeum_cryptofilum__374847[&&NHX:C=255.0.255])123[&&NHX:S=Archaea:B=90.0:C=255.0.255])124[&&NHX:B=70.0:C=153.0.204],(AQUAE__Aquifex_aeolicus__224324[&&NHX:C=153.0.204],BACTN__Bacteroides_thetaiotaomicron__226186[&&NHX:C=153.0.204],BACSU__Bacillus_subtilis__224308[&&NHX:C=153.0.204],CHLTR__Chlamydia_trachomatis__272561[&&NHX:C=153.0.204],CHLAA__Chloroflexus_aurantiacus__324602[&&NHX:C=153.0.204],DEIRA__Deinococcus_radiodurans__243230[&&NHX:C=153.0.204],DICTD__Dictyoglomus_turgidum__515635[&&NHX:C=153.0.204],FUSNN__Fusobacterium_nucleatum__190304[&&NHX:C=153.0.204],(GLOVI__Gloeobacter_violaceus__251221[&&NHX:C=153.0.204],SYNY3__Synechocystis__1111708[&&NHX:C=153.0.204])125[&&NHX:S=Cyanobacteria:B=90.0:C=153.0.204],(GEOSL__Geobacter_sulfurreducens__243231[&&NHX:C=153.0.204],(BRADU__Bradyrhizobium_japonicum__224911[&&NHX:C=153.0.204],(ECOLI__Escherichia_coli__83333[&&NHX:C=153.0.204],PSEAE__Pseudomonas_aeruginosa__208964[&&NHX:C=153.0.204])126[&&NHX:S=Gammaproteobacteria:B=90.0:C=153.0.204])127[&&NHX:B=90.0:C=153.0.204])128[&&NHX:S=Proteobacteria:B=30.0:C=153.0.204],LEPIN__Leptospira_interrogans__189518[&&NHX:C=153.0.204],(MYCTX__Mycobacterium_tuberculosis__1773[&&NHX:C=153.0.204],STRCO__Streptomyces_coelicolor__100226[&&NHX:C=153.0.204])129[&&NHX:S=Actinomycetales:B=70.0:C=153.0.204],RHOBA__Rhodopirellula_baltica__243090[&&NHX:C=153.0.204],THEMA__Thermotoga_maritima__243274[&&NHX:C=153.0.204],THEYD__Thermodesulfovibrio_yellowstonii__289376[&&NHX:C=153.0.204])130[&&NHX:S=Bacteria:B=70.0:C=153.0.204])131[&&NHX:S=Cellular_organisms:B=70.0:C=153.0.204];