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create clean voronoi point order PR #1371 #2426
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rsbivand committed Sep 12, 2024
1 parent a07adc6 commit 2baaec7
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2 changes: 2 additions & 0 deletions NEWS.md
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@@ -1,5 +1,7 @@
# version 1.0-18

* add flag for preservation of point order in `st_voronoi` #1371 for GEOS >= 3.12

* fix build failure with GDAL < 3.4.0 #2436

# version 1.0-17
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30 changes: 23 additions & 7 deletions R/geom-transformers.R
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Expand Up @@ -450,6 +450,7 @@ st_minimum_rotated_rectangle.sf = function(x, dTolerance, ...) {
#' @name geos_unary
#' @export
#' @param envelope object of class \code{sfc} or \code{sfg} containing a \code{POLYGON} with the envelope for a voronoi diagram; this only takes effect when it is larger than the default envelope, chosen when \code{envelope} is an empty polygon
#' @param point_order logical; preserve point order if TRUE and GEOS version >= 3.12; overrides bOnlyEdges
#' @details \code{st_voronoi} creates voronoi tesselation. \code{st_voronoi} requires GEOS version 3.5 or above
#' @examples
#' set.seed(1)
Expand All @@ -470,33 +471,48 @@ st_minimum_rotated_rectangle.sf = function(x, dTolerance, ...) {
#' # compute Voronoi polygons:
#' pols = st_collection_extract(st_voronoi(do.call(c, st_geometry(pts))))
#' # match them to points:
#' pts$pols = pols[unlist(st_intersects(pts, pols))]
#' pts_pol = st_intersects(pts, pols)
#' pts$pols = pols[unlist(pts_pol)] # re-order
#' if (isTRUE(try(compareVersion(sf_extSoftVersion()["GEOS"], "3.12.0") > -1,
#' silent = TRUE))) {
#' pols_po = st_collection_extract(st_voronoi(do.call(c, st_geometry(pts)),
#' point_order = TRUE)) # GEOS >= 3.12 can preserve order of inputs
#' pts_pol_po = st_intersects(pts, pols_po)
#' print(all(unlist(pts_pol_po) == 1:(n/2)))
#' }
#' plot(pts["id"], pch = 16) # ID is color
#' plot(st_set_geometry(pts, "pols")["id"], xlim = c(0,1), ylim = c(0,1), reset = FALSE)
#' plot(st_geometry(pts), add = TRUE)
#' layout(matrix(1)) # reset plot layout
#' }
st_voronoi = function(x, envelope, dTolerance = 0.0, bOnlyEdges = FALSE)
st_voronoi = function(x, envelope, dTolerance = 0.0, bOnlyEdges = FALSE, point_order = FALSE)
UseMethod("st_voronoi")

#' @export
st_voronoi.sfg = function(x, envelope = st_polygon(), dTolerance = 0.0, bOnlyEdges = FALSE)
get_first_sfg(st_voronoi(st_sfc(x), st_sfc(envelope), dTolerance, bOnlyEdges = bOnlyEdges))
st_voronoi.sfg = function(x, envelope = st_polygon(), dTolerance = 0.0, bOnlyEdges = FALSE, point_order = FALSE)
get_first_sfg(st_voronoi(st_sfc(x), st_sfc(envelope), dTolerance, bOnlyEdges = bOnlyEdges, point_order = point_order))

#' @export
st_voronoi.sfc = function(x, envelope = st_polygon(), dTolerance = 0.0, bOnlyEdges = FALSE) {
st_voronoi.sfc = function(x, envelope = st_polygon(), dTolerance = 0.0, bOnlyEdges = FALSE, point_order = FALSE) {
if (compareVersion(CPL_geos_version(), "3.5.0") > -1) {
if (isTRUE(st_is_longlat(x)))
warning("st_voronoi does not correctly triangulate longitude/latitude data")
if (compareVersion(CPL_geos_version(), "3.12.0") > -1) {
bOnlyEdges = as.integer(bOnlyEdges)
if (point_order) bOnlyEdges = 2L # GEOS enum GEOS_VORONOI_PRESERVE_ORDER
} else {
if (point_order)
warning("Point order retention not supported for GEOS ", CPL_geos_version())
}
st_sfc(CPL_geos_voronoi(x, st_sfc(envelope), dTolerance = dTolerance,
bOnlyEdges = as.integer(bOnlyEdges)))
} else
stop("for voronoi, GEOS version 3.5.0 or higher is required")
}

#' @export
st_voronoi.sf = function(x, envelope = st_polygon(), dTolerance = 0.0, bOnlyEdges = FALSE) {
st_set_geometry(x, st_voronoi(st_geometry(x), st_sfc(envelope), dTolerance, bOnlyEdges))
st_voronoi.sf = function(x, envelope = st_polygon(), dTolerance = 0.0, bOnlyEdges = FALSE, point_order = FALSE) {
st_set_geometry(x, st_voronoi(st_geometry(x), st_sfc(envelope), dTolerance, bOnlyEdges = bOnlyEdges, point_order = point_order))
}

#' @name geos_unary
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14 changes: 12 additions & 2 deletions man/geos_unary.Rd

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3 changes: 3 additions & 0 deletions src/geos.cpp
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Expand Up @@ -35,6 +35,9 @@
# if GEOS_VERSION_MINOR >= 11
# define HAVE311
# endif
# if GEOS_VERSION_MINOR >= 12
# define HAVE312
# endif
#else
# if GEOS_VERSION_MAJOR > 3
# define HAVE340
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14 changes: 13 additions & 1 deletion tests/geos.R
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Expand Up @@ -73,14 +73,26 @@ st_line_merge(mls)
if (isTRUE(try(compareVersion(sf_extSoftVersion()["GEOS"], "3.5.0") > -1, silent = TRUE))) {
# voronoi:
set.seed(1)
x = st_multipoint(matrix(runif(10),,2))
m = matrix(runif(10),,2)
x = st_multipoint(m)
box = st_polygon(list(rbind(c(0,0),c(1,0),c(1,1),c(0,1),c(0,0))))
v = st_sfc(st_voronoi(x, st_sfc(box)))
plot(v, col = 0, border = 1, axes = TRUE)
plot(box, add = TRUE, col = 0, border = 1) # a larger box is returned, as documented
plot(x, add = TRUE, col = 'red', cex=2, pch=16)
plot(st_intersection(st_cast(v), box)) # clip to smaller box
plot(x, add = TRUE, col = 'red', cex=2, pch=16)
v0 = st_sfc(st_voronoi(st_sfc(x), st_sfc(box)))
pal <- c("black", "red", "green", "blue", "orange")
opar = par(mfrow=c(1,2))
plot(st_collection_extract(v0, "POLYGON"), col=pal)
text(m[,1], m[,2], label=1:5, col="white")
if (isTRUE(try(compareVersion(sf_extSoftVersion()["GEOS"], "3.12.0") > -1, silent = TRUE))) {
v2 = st_sfc(st_voronoi(st_sfc(x), st_sfc(box), point_order=TRUE))
plot(st_collection_extract(v2, "POLYGON"), col=pal)
text(m[,1], m[,2], label=1:5, col="white")
}
par(opar)

v = st_voronoi(x)
print(class(v))
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22 changes: 17 additions & 5 deletions tests/geos.Rout.save
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@@ -1,7 +1,7 @@

R version 4.2.2 Patched (2022-11-10 r83330) -- "Innocent and Trusting"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R version 4.4.1 (2024-06-14) -- "Race for Your Life"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Expand Down Expand Up @@ -162,14 +162,26 @@ LINESTRING (0 0, 1 1, 2 0)
> if (isTRUE(try(compareVersion(sf_extSoftVersion()["GEOS"], "3.5.0") > -1, silent = TRUE))) {
+ # voronoi:
+ set.seed(1)
+ x = st_multipoint(matrix(runif(10),,2))
+ m = matrix(runif(10),,2)
+ x = st_multipoint(m)
+ box = st_polygon(list(rbind(c(0,0),c(1,0),c(1,1),c(0,1),c(0,0))))
+ v = st_sfc(st_voronoi(x, st_sfc(box)))
+ plot(v, col = 0, border = 1, axes = TRUE)
+ plot(box, add = TRUE, col = 0, border = 1) # a larger box is returned, as documented
+ plot(x, add = TRUE, col = 'red', cex=2, pch=16)
+ plot(st_intersection(st_cast(v), box)) # clip to smaller box
+ plot(x, add = TRUE, col = 'red', cex=2, pch=16)
+ v0 = st_sfc(st_voronoi(st_sfc(x), st_sfc(box)))
+ pal <- c("black", "red", "green", "blue", "orange")
+ opar = par(mfrow=c(1,2))
+ plot(st_collection_extract(v0, "POLYGON"), col=pal)
+ text(m[,1], m[,2], label=1:5, col="white")
+ if (isTRUE(try(compareVersion(sf_extSoftVersion()["GEOS"], "3.12.0") > -1, silent = TRUE))) {
+ v2 = st_sfc(st_voronoi(st_sfc(x), st_sfc(box), point_order=TRUE))
+ plot(st_collection_extract(v2, "POLYGON"), col=pal)
+ text(m[,1], m[,2], label=1:5, col="white")
+ }
+ par(opar)
+
+ v = st_voronoi(x)
+ print(class(v))
Expand Down Expand Up @@ -666,4 +678,4 @@ CRS: NA
>
> proc.time()
user system elapsed
19.725 0.860 19.747
11.890 0.081 12.018

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