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Moved to using GitHub hosted macOS ARM build; fixed pip install timeout issue in CIs; ARM tests for python 3.8-3.12 #1

Moved to using GitHub hosted macOS ARM build; fixed pip install timeout issue in CIs; ARM tests for python 3.8-3.12

Moved to using GitHub hosted macOS ARM build; fixed pip install timeout issue in CIs; ARM tests for python 3.8-3.12 #1

Workflow file for this run

name: Build macOS ARM
on:
push:
branches:
- '*'
pull_request:
branches: [master, release]
workflow_dispatch:
env:
MACOSX_DEPLOYMENT_TARGET: 11.0
jobs:
build:
runs-on: ${{ matrix.os }}
strategy:
matrix:
include:
- os: macos-14
TARGET: macos
CMD_BUILD: python3 setup.py bdist_wheel --plat-name macosx_11_0_arm64
steps:
- uses: actions/checkout@v3
- name: Install dependencies
run: arch -arm64 brew reinstall zlib
- name: Setup pyenv
env:
ACTIONS_ALLOW_UNSECURE_COMMANDS: true
MACOSX_DEPLOYMENT_TARGET: 11.0
PYTHON_CONFIGURE_OPTS: "--enable-framework"
CFLAGS: "-Wno-implicit-function-declaration"
LDFLAGS: "-L/usr/local/opt/zlib/lib"
CPPFLAGS: "-I/usr/local/opt/zlib/include"
PKG_CONFIG_PATH: "/usr/local/opt/zlib/lib/pkgconfig"
uses: "gabrielfalcao/pyenv-action@v13"
with:
default: "3.8"
command: pip3 install -U pip3 wheel setuptools
- name: Collect submodules
uses: actions/checkout@v3
with:
submodules: 'recursive'
- name: Install dependencies
run: |
python3 -m pip install --upgrade pip
pip install wheel setuptools
- name: Built wheel for ${{matrix.TARGET}}
run: ${{matrix.CMD_BUILD}}
- name: Upload Python wheel
uses: actions/upload-artifact@v3
with:
name: Python wheel
path: ${{github.workspace}}/dist/raidionicsmaps-*.whl
if-no-files-found: error
test:
needs: build
strategy:
matrix:
os: [ macos-14 ]
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
runs-on: ${{ matrix.os }}
steps:
- name: Set up pyenv using Python ${{ matrix.python-version }}
uses: "gabrielfalcao/pyenv-action@v13"
with:
default: ${{ matrix.python-version }}
command: pip3 install -U pip3 wheel setuptools
- name: Download artifact
uses: actions/download-artifact@v3
with:
name: "Python wheel"
- name: Install wheel
run: pip3 install --default-timeout=100 --find-links=${{github.workspace}} raidionicsmaps-*
shell: bash
- name: Test CLI
run: raidionicsmaps --help
- name: Clone repo
uses: actions/checkout@v1
- name: Heatmap computation unit test
run: cd ${{github.workspace}}/tests && python3 heatmap_generation_test.py