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[pre-commit.ci] auto fixes from pre-commit.com hooks #408

[pre-commit.ci] auto fixes from pre-commit.com hooks

[pre-commit.ci] auto fixes from pre-commit.com hooks #408

Workflow file for this run

name: Run Tests
on: [push, pull_request]
jobs:
tests:
env:
ENV_NAME: tests
PYTHON: ${{ matrix.python-version }}
WITH_SUDO: yes
OS: ${{ matrix.os }}
name: Testing
runs-on: ${{ matrix.os }}
defaults:
run:
# Adding -l {0} helps ensure conda can be found properly in windows.
shell: bash -l {0}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, macos-latest]
python-version: [3.8, 3.9, "3.10"]
steps:
- uses: actions/checkout@master
with:
fetch-depth: 1
- name: Setup Mambaforge
uses: conda-incubator/setup-miniconda@v2
with:
miniforge-variant: Mambaforge
miniforge-version: latest
use-mamba: true
python-version: ${{ env.PYTHON }}
environment-file: ci/${{ env.ENV_NAME }}.yaml
activate-environment: ${{ env.ENV_NAME }}
- name: Mamba Info
run: |
mamba info -a
mamba list
PYVER=`python -c "import sys; print('{:d}.{:d}'.format(sys.version_info.major, sys.version_info.minor))"`
if [[ $PYVER != ${{ env.PYTHON }} ]]; then
exit 1;
fi
- name: Install
run: |
pip install -e .[all]
- name: Run Tests
run: |
python -m pytest --cov=simpleDS --cov-config=.coveragerc --cov-report xml:./coverage.xml --junitxml=test-reports/xunit.xml
- uses: codecov/codecov-action@master
if: matrix.os == 'ubuntu-latest' && success()
with:
token: ${{secrets.CODECOV_TOKEN}} #required
file: ./coverage.xml #optional
- name: Upload Coverage (Mac OS)
if: matrix.os == 'macos-latest' && success()
run: |
bash <(curl -s https://codecov.io/bash) -t ${{secrets.CODECOV_TOKEN}}
notebook:
name: Tutorial Notebook
runs-on: ubuntu-latest
defaults:
run:
# Adding -l {0} helps ensure conda can be found properly in windows.
shell: bash -l {0}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest]
python-version: [3.7]
needs: [tests]
env:
ENV_NAME: tutorial
WITH_SUDO: yes
PYTHON: ${{ matrix.python-version }}
OS: ${{ matrix.os }}
steps:
- uses: actions/checkout@master
with:
fetch-depth: 1
- name: Setup Mambaforge
uses: conda-incubator/setup-miniconda@v2
with:
miniforge-variant: Mambaforge
miniforge-version: latest
use-mamba: true
python-version: ${{ env.PYTHON }}
environment-file: ci/${{ env.ENV_NAME }}.yaml
activate-environment: ${{ env.ENV_NAME }}
- name: Mamba Info
run: |
mamba info -a
mamba list
PYVER=`python -c "import sys; print('{:d}.{:d}'.format(sys.version_info.major, sys.version_info.minor))"`
if [[ $PYVER != ${{ env.PYTHON }} ]]; then
exit 1;
fi
- name: Install
run: |
pip install -e .[all]
- name: Run Tests
run: |
python -m pytest --nbval --current-env docs/examples/simpleDS_tutorial.ipynb