refactor(docs): move from reST to Markdown (#263)

Convert docs from reStructuredText to Markdown so that the changelog
file is compatible with Release Please.

AUTHORS.md

@@ -0,0 +1,19 @@
+# Authors
+
+The list of contributors in alphabetical order:
+
+- [Adelina Lintuluoto](https://orcid.org/0000-0002-0726-1452)
+- [Agisilaos Kounelis](https://orcid.org/0000-0001-9312-3189)
+- [Audrius Mecionis](https://orcid.org/0000-0002-3759-1663)
+- [Anton Khodak](https://orcid.org/0000-0003-3263-4553)
+- [Camila Diaz](https://orcid.org/0000-0001-5543-797X)
+- [Dan Leehr](https://orcid.org/0000-0003-3221-9579)
+- [Daniel Prelipcean](https://orcid.org/0000-0002-4855-194X)
+- [Diego Rodriguez](https://orcid.org/0000-0003-0649-2002)
+- [Dinos Kousidis](https://orcid.org/0000-0002-4914-4289)
+- [Marco Donadoni](https://orcid.org/0000-0003-2922-5505)
+- [Marco Vidal](https://orcid.org/0000-0002-9363-4971)
+- [Michael R. Crusoe](https://orcid.org/0000-0002-2961-9670)
+- [Rokas Maciulaitis](https://orcid.org/0000-0003-1064-6967)
+- [Sinclert Pérez](https://www.linkedin.com/in/sinclert)
+- [Tibor Simko](https://orcid.org/0000-0001-7202-5803)

CHANGELOG.md

@@ -0,0 +1,113 @@
+# Changelog
+
+## 0.9.2 (2023-12-12)
+
+- Adds automated multi-platform container image building for amd64 and arm64 architectures.
+- Adds metadata labels to Dockerfile.
+- Fixes container image building on the arm64 architecture.
+
+## 0.9.1 (2023-09-27)
+
+- Fixes container image names to be Podman-compatible.
+
+## 0.9.0 (2023-01-19)
+
+- Adds support for specifying `slurm_partition` and `slurm_time` for Slurm compute backend jobs.
+- Adds support for Kerberos authentication for workflow orchestration.
+- Adds support for Rucio authentication for workflow jobs.
+- Changes the base image of the component to Ubuntu 20.04 LTS and reduces final Docker image size by removing build-time dependencies.
+- Fixes status reporting for failed jobs that were incorrectly considered successful.
+
+## 0.8.1 (2022-02-07)
+
+- Adds support for specifying `kubernetes_job_timeout` for Kubernetes compute backend jobs.
+
+## 0.8.0 (2021-11-22)
+
+- Adds support for custom workspace paths.
+- Adds supoort for `cwltool` version `3.1.20210628163208`
+
+## 0.7.6 (2021-07-05)
+
+- Changes internal dependencies to remove click.
+
+## 0.7.5 (2021-04-28)
+
+- Adds support for specifying `kubernetes_memory_limit` for Kubernetes compute backend jobs.
+
+## 0.7.4 (2021-03-23)
+
+- Changes job command serialisation using central REANA-Commons job command serialiser.
+
+## 0.7.3 (2021-03-17)
+
+- Changes workflow engine instantiation to use central REANA-Commons factory.
+- Changes status `succeeded` to `finished` to use central REANA nomenclature.
+
+## 0.7.2 (2021-02-03)
+
+- Fixes minor code warnings.
+- Changes CI system to include Python flake8 and Dockerfile hadolint checkers.
+
+## 0.7.1 (2020-11-10)
+
+- Adds support for specifying `htcondor_max_runtime` and `htcondor_accounting_group` for HTCondor compute backend jobs.
+- Fixes restarting of CWL workflows.
+
+## 0.7.0 (2020-10-20)
+
+- Adds pinning of all Python dependencies allowing to easily rebuild component images at later times.
+- Adds option to specify unpacked Docker images as workflow step requirement.
+- Adds support for handling new workflow operational options.
+- Adds support for VOMS proxy as a new authentication method.
+- Changes base image to use Python 3.8.
+- Changes code formatting to respect `black` coding style.
+- Changes documentation to single-page layout.
+
+## 0.6.1 (2020-05-25)
+
+- Upgrades REANA-Commons package using latest Kubernetes Python client version.
+
+## 0.6.0 (2019-12-20)
+
+- Allows to specify compute backend (HTCondor, Kubernetes or Slurm) and
+  Kerberos authentication requirement for CWL workflow jobs.
+- Upgrades cwltool to 1.0.20191022103248.
+- Moves workflow engine to the same Kubernetes pod with the REANA-Job-Controller
+  (sidecar pattern).
+
+## 0.5.0 (2019-04-23)
+
+- Makes workflow engine independent of Celery so that independent workflow
+  instances are created on demand for each user.
+- Replaces `api_client` module with centralised one from REANA-Commons.
+- Introduces CVMFS mounts in job specifications.
+- Sets default file mode creation mask to 002 so that workflows are able to
+  write to shared directories for any user identity under which the workflow
+  processes may be running.
+- Makes docker image slimmer by using `python:2.7-slim`.
+- Centralises log level and log format configuration.
+- Upgrades cwltool to 1.0.20181118133959.
+
+## 0.4.0 (2018-11-06)
+
+- Improves AMQP re-connection handling. Switches from `pika` to `kombu`.
+- Utilises common openapi client for communication with REANA-Job-Controller.
+- Changes license to MIT.
+
+## 0.3.2 (2018-09-25)
+
+- Upgrades to latest `cwltool` (`1.0.20180912090223`).
+
+## 0.3.1 (2018-09-07)
+
+- Pins REANA-Commons dependency.
+
+## 0.3.0 (2018-08-10)
+
+- Tracks progress of workflow runs.
+
+## 0.2.0 (2018-04-19)
+
+- Initial public release.
+

CONTRIBUTING.rst → CONTRIBUTING.md

@@ -1,20 +1,18 @@
-Contributing
-============
+# Contributing
 
 Bug reports, issues, feature requests, and other contributions are welcome. If you find
 a demonstrable problem that is caused by the REANA code, please:
 
-1. Search for `already reported problems
-   <https://github.com/reanahub/reana-workflow-engine-cwl/issues>`_.
+1. Search for [already reported problems](https://github.com/reanahub/reana-workflow-engine-cwl/issues).
 2. Check if the issue has been fixed or is still reproducible on the
    latest `master` branch.
 3. Create an issue, ideally with **a test case**.
 
 If you create a pull request fixing a bug or implementing a feature, you can run
 the tests to ensure that everything is operating correctly:
 
-.. code-block:: console
-
-    $ ./run-tests.sh
+```console
+$ ./run-tests.sh
+```
 
 Each pull request should preserve or increase code coverage.

MANIFEST.in

@@ -6,7 +6,6 @@
 
 include *.json
 include *.md
-include *.rst
 include *.sh
 include *.txt
 include *.yaml
@@ -23,6 +22,6 @@ prune docs/_build
 recursive-include badges *.json
 recursive-include docs *.py
 recursive-include docs *.png
-recursive-include docs *.rst
+recursive-include docs *.md
 recursive-include tests *.py
 global-exclude *.py[co] .DS_Store