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feat(helm): add value to customise env vars of job controller and workflow engines (#781) #781

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Feb 28, 2024
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feat(helm): add value to customise env vars of job controller and workflow engines (#781) #781

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35ee032
feat(helm): add values to customise env vars of workflow engines (#781)
mdonadoni Feb 22, 2024
634691f
feat(helm): add value to customise env vars of job controller (#781)
mdonadoni Feb 22, 2024
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5 changes: 5 additions & 0 deletions helm/reana/README.md
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Expand Up @@ -10,6 +10,7 @@ This Helm automatically prefixes all names using the release name to avoid colli
|----------------------------------------------------------|--------------------------------------------------------------------------------------|-------------------------------------------------|
| `components.reana_db.enabled` | Instantiate a PostgreSQL database inside the cluster | true |
| `components.reana_db.image` | [PostgreSQL image](https://hub.docker.com/_/postgres) to use | `docker.io/library/postgres:12.13` |
| `components.reana_job_controller.environment` | [REANA-Job-Controller](https://github.com/reanahub/reana-job-controller) environment variables | `{}` |
| `components.reana_job_controller.image` | [REANA-Job-Controller image](https://hub.docker.com/r/reanahub/reana-job-controller) to use | `docker.io/reanahub/reana-job-controller:<chart-release-version>` |
| `components.reana_message_broker.image` | [REANA-Message-Broker image](https://hub.docker.com/r/reanahub/reana-message-broker) to use | `docker.io/reanahub/reana-message-broker:<chart-release-version>` |
| `components.reana_message_broker.imagePullPolicy` | REANA-Message-Broker image pull policy | IfNotPresent |
Expand Down Expand Up @@ -50,9 +51,13 @@ This Helm automatically prefixes all names using the release name to avoid colli
| `components.reana_workflow_controller.environment.REANA_JOB_HOSTPATH_MOUNTS` | JSON list of optional hostPath mounts, for all user jobs. Each mount object has a key `name` (name of the mount), `hostPath` (path to the directory to be mounted from the Kubernetes nodes) and `mountPath` (path inside the job containers where the `hostPath` will be mounted) | None |
| `components.reana_workflow_controller.environment.REANA_RUNTIME_KUBERNETES_KEEP_ALIVE_JOBS_WITH_STATUSES` | Keep alive Kubernetes user runtime jobs depending on status (`finished` and/or `failed`). | None |
| `components.reana_workflow_controller.environment.REANA_JOB_STATUS_CONSUMER_PREFETCH_COUNT` | Define max number of unacknowledged deliveries that are permitted on `jobs-status` queue consumer. | 10 |
| `components.reana_workflow_engine_cwl.environment` | [REANA-Workflow-Engine-CWL](https://github.com/reanahub/reana-workflow-engine-cwl) environment variables | `{}` |
| `components.reana_workflow_engine_cwl.image` | [REANA-Workflow-Engine-CWL image](https://hub.docker.com/r/reanahub/reana-workflow-engine-cwl) to use | `docker.io/reanahub/reana-workflow-engine-cwl:<chart-release-version>` |
| `components.reana_workflow_engine_serial.environment` | [REANA-Workflow-Engine-Serial](https://github.com/reanahub/reana-workflow-engine-serial) environment variables | `{}` |
| `components.reana_workflow_engine_serial.image` | [REANA-Workflow-Engine-Serial image](https://hub.docker.com/r/reanahub/reana-workflow-engine-serial) to use | `docker.io/reanahub/reana-workflow-engine-serial:<chart-release-version>` |
| `components.reana_workflow_engine_yadage.environment` | [REANA-Workflow-Engine-yadage](https://github.com/reanahub/reana-workflow-engine-yadage) environment variables | `{}` |
| `components.reana_workflow_engine_yadage.image` | [REANA-Workflow-Engine-Yadage image](https://hub.docker.com/r/reanahub/reana-workflow-engine-yadage) to use | `docker.io/reanahub/reana-workflow-engine-yadage:<chart-release-version>` |
| `components.reana_workflow_engine_snakemake.environment` | [REANA-Workflow-Engine-Snakemake](https://github.com/reanahub/reana-workflow-engine-snakemake) environment variables | `{}` |
| `components.reana_workflow_engine_snakemake.image` | [REANA-Workflow-Engine-Snakemake image](https://hub.docker.com/r/reanahub/reana-workflow-engine-snakemake) to use | `docker.io/reanahub/reana-workflow-engine-snakemake:<chart-release-version>` |
| `compute_backends` | List of supported compute backends (kubernetes, htcondorcern, slurmcern) | "kubernetes" |
| `db_env_config.REANA_DB_HOST` | Environment variable to connect to external databases | `<chart-release-name>-db` |
Expand Down
12 changes: 12 additions & 0 deletions helm/reana/templates/reana-workflow-controller.yaml
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Expand Up @@ -146,6 +146,18 @@ spec:
value: {{ .Values.components.reana_workflow_engine_serial.image }}
- name: REANA_WORKFLOW_ENGINE_IMAGE_SNAKEMAKE
value: {{ .Values.components.reana_workflow_engine_snakemake.image }}
# Environment variables for workflow engines
- name: REANA_WORKFLOW_ENGINE_CWL_ENV_VARS
value: {{ .Values.components.reana_workflow_engine_cwl.environment | toJson | quote }}
- name: REANA_WORKFLOW_ENGINE_SERIAL_ENV_VARS
value: {{ .Values.components.reana_workflow_engine_serial.environment | toJson | quote }}
- name: REANA_WORKFLOW_ENGINE_SNAKEMAKE_ENV_VARS
value: {{ .Values.components.reana_workflow_engine_snakemake.environment | toJson | quote }}
- name: REANA_WORKFLOW_ENGINE_YADAGE_ENV_VARS
value: {{ .Values.components.reana_workflow_engine_yadage.environment | toJson | quote }}
# Environment variables for job controller
- name: REANA_JOB_CONTROLLER_ENV_VARS
value: {{ .Values.components.reana_job_controller.environment | toJson | quote }}
{{- if .Values.reana_hostname }}
- name: REANA_HOSTNAME
value: {{ .Values.reana_hostname }}
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5 changes: 5 additions & 0 deletions helm/reana/values.yaml
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Expand Up @@ -108,14 +108,19 @@ components:
REANA_JOB_STATUS_CONSUMER_PREFETCH_COUNT: 10
reana_workflow_engine_cwl:
image: docker.io/reanahub/reana-workflow-engine-cwl:0.9.2
environment: {}
reana_workflow_engine_yadage:
image: docker.io/reanahub/reana-workflow-engine-yadage:0.9.3
environment: {}
reana_workflow_engine_serial:
image: docker.io/reanahub/reana-workflow-engine-serial:0.9.2
environment: {}
reana_workflow_engine_snakemake:
image: docker.io/reanahub/reana-workflow-engine-snakemake:0.9.2
environment: {}
reana_job_controller:
image: docker.io/reanahub/reana-job-controller:0.9.2
environment: {}
reana_message_broker:
imagePullPolicy: IfNotPresent
image: docker.io/reanahub/reana-message-broker:0.9.2
Expand Down
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