From 3d101b303a2f58323fe3d7dd0f5839285a6064cb Mon Sep 17 00:00:00 2001
From: Kai Zhang <zhangkai33@westlake.edu.cn>
Date: Mon, 23 Sep 2024 12:01:26 +0800
Subject: [PATCH] update

---
 .github/workflows/docs.yml | 16 ++++++++--------
 docs/_static/versions.json | 13 ++++---------
 docs/conf.py               |  6 +++---
 3 files changed, 15 insertions(+), 20 deletions(-)

diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml
index 00ca3b5..eea1fe0 100644
--- a/.github/workflows/docs.yml
+++ b/.github/workflows/docs.yml
@@ -93,11 +93,11 @@ jobs:
         ref: 'gh-pages'
         path: 'gh-pages-folder'
 
-#    - name: Deploy (preferred version)
-#      uses: JamesIves/github-pages-deploy-action@v4
-#      with:
-#        single-commit: true
-#        branch: gh-pages
-#        folder: gh-pages-folder/version/${{ env.PREFERRED_VERSION }}
-#        clean: true
-#        clean-exclude: version
\ No newline at end of file
+    - name: Deploy (preferred version)
+      uses: JamesIves/github-pages-deploy-action@v4
+      with:
+        single-commit: true
+        branch: gh-pages
+        folder: gh-pages-folder/version/${{ env.PREFERRED_VERSION }}
+        clean: true
+        clean-exclude: version
\ No newline at end of file
diff --git a/docs/_static/versions.json b/docs/_static/versions.json
index a292dde..b2931ea 100644
--- a/docs/_static/versions.json
+++ b/docs/_static/versions.json
@@ -5,14 +5,9 @@
         "url": "https://kzhang.org/SnapATAC2/version/dev/"
     },
     {
-        "name": "2.7 (stable)",
-        "version": "2.7",
+        "name": "0.1 (stable)",
+        "version": "0.1",
         "preferred": true,
-        "url": "https://kzhang.org/SnapATAC2/version/2.7/"
-    },
-    {
-        "name": "2.6",
-        "version": "2.6",
-        "url": "https://kzhang.org/SnapATAC2/version/2.6/"
-    },
+        "url": "https://kzhang.org/SnapATAC2/version/dev/"
+    }
 ]
\ No newline at end of file
diff --git a/docs/conf.py b/docs/conf.py
index 83645b9..808a4b8 100644
--- a/docs/conf.py
+++ b/docs/conf.py
@@ -121,7 +121,7 @@
         "alt_text": "precellar",
     },
 
-    "github_url": "https://github.com/kaizhang/SnapATAC2",
+    "github_url": "https://github.com/regulatory-genomics/precellar",
     "external_links": [
     ],
     "header_links_before_dropdown": 6,
@@ -133,12 +133,12 @@
 
     "switcher": {
         "version_match": switcher_version,
-        "json_url": "https://raw.githubusercontent.com/kaizhang/SnapATAC2/main/docs/_static/versions.json", 
+        "json_url": "https://raw.githubusercontent.com/regulatory-genomics/precellar/refs/heads/main/docs/_static/versions.json",
     },
 }
 
 commit = subprocess.check_output(['git', 'rev-parse', 'HEAD']).strip().decode('ascii')
-code_url = f"https://github.com/kaizhang/SnapATAC2/blob/{commit}"
+code_url = f"https://github.com/regulatory-genomics/precellar/blob/{commit}"
 
 # based on numpy doc/source/conf.py
 def linkcode_resolve(domain, info):