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DESCRIPTION
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DESCRIPTION
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Package: Chromatograms
Title: Infrastructure for Chromatographic Mass Spectrometry Data
Version: 0.2.0
Description: The Chromatograms packages defines a efficient infrastructure
for storing and handling of chromatographic mass spectrometry data. It
provides different implementations of *backends* to store and represent the
data. Such backends can be optimized for small memory footprint or fast
data access/processing. A lazy evaluation queue and chunk-wise processing
capabilities ensure efficient analysis of also very large data sets.
Authors@R: c(person(given = "Laurent", family = "Gatto",
comment = c(ORCID = "0000-0002-1520-2268"),
email = "laurent.gatto@uclouvain.be",
role = c("aut")),
person(given = "Johannes", family = "Rainer",
email = "Johannes.Rainer@eurac.edu",
role = c("aut"),
comment = c(ORCID = "0000-0002-6977-7147")),
person(given = "Philippine", family = "Louail",
email = "philippine.louail@eurac.edu",
role = c("aut", "cre"),
comment = c(ORCID = "0009-0007-5429-6846")))
Depends:
ProtGenerics (>= 1.35.4),
R (>= 4.2.0)
Imports:
methods,
S4Vectors,
MsCoreUtils (>= 1.7.5),
IRanges
Suggests:
testthat,
knitr (>= 1.1.0),
rmarkdown,
BiocStyle
License: Artistic-2.0
Encoding: UTF-8
VignetteBuilder: knitr
BugReports: https://github.com/RforMassSpectrometry/Chromatograms/issues
URL: https://github.com/RforMassSpectrometry/Chromatograms
biocViews: Infrastructure, Proteomics, MassSpectrometry, Metabolomics
Roxygen: list(markdown=TRUE)
RoxygenNote: 7.3.2
Collate:
'AllGenerics.R'
'ChromBackend-functions.R'
'ChromBackend.R'
'ChromBackendMemory-functions.R'
'hidden_aliases.R'
'helpers.R'
'ChromBackendMemory.R'