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NEWS.md

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metabonaut 0.0

Changes in 0.0.6

  • Moving The PercentMissing filtering at the end of the pre-processing steps as it needs to be done before normalization.
  • Addition of collapsing code to improve readability.
  • Reduction of table size

Changes in 0.0.5

  • Require MsIO version 0.0.8 to allow reading of stored MsBackendMetaboLights objects.
  • Small updates and changes to the Seamless Alignment vignette:
    • simplify import of previously stored result object
    • avoid using the variable name param for every parameter object

Changes in 0.0.4

  • Required alabaster.se.
  • In the end-to-end vignette:
    • Removal of Spectra data in depth visualisation to move to the Data investigation vignette
    • Removal of internal standard matching to features in the Normalization part.
  • Save an load lcms1 and res object from the end-to-end workflow to be used in the Seamless Alignment vignette. Using MsIO and alabaster.se

Changes in 0.0.3

  • Require xcms version 4.3.4 and install the package from github.

Changes in 0.0.2

  • Switch to Quarto instead of Rmarkdown
  • Addition of Alignment to reference dataset vignette
  • Addition of the Data investigation vignette
  • Addition of the Install vignette

Changes in 0.0.1

  • Addition of basic files for a workflow package.
  • Addition of the end-to-end vignette.