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version 0.9.0

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@rhpvorderman rhpvorderman released this 21 May 11:27
· 81 commits to develop since this release
c953a71
  • MultiQC support since MultiQC version 1.22
  • Sort modules for paired end reports in the same order as single end reports.
    For example, the sequence length distributions for read 1 and read 2 are now
    right after each other.
  • Add common human genome repeats and Illumina poly-G dark cycles to the
    overrepresented sequences database.
  • Illumina adapter trimming sequences were added to the contaminants database
    as these were missing from the UniVec database.
  • Sequence identity, rather than kmers matched is shown as a metric for
    similarity in the overrepresented sequences table.
  • Overrepresented sequence classification now uses stable sorting to ensure
    the classification results are the same on each rerun.
  • Overrepresented sequences are now classified using Smith-Waterman alignment
    and sequence identity.
  • Fix an off by one error in the insert size metrics that was triggered for
    insert sizes larger than 300 bp.