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lr-kallisto for improved lineage deconvolution? #3

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hoelzer opened this issue Jul 30, 2024 · 0 comments

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hoelzer commented Jul 30, 2024

https://www.biorxiv.org/content/10.1101/2024.07.19.604364v1

The lr-kallisto method is available via release 0.51 of kallisto at https://github.com/pachterlab/kallisto.

would be easy to test or @EvaFriederike ? Just bump kallisto version and make a parameter switch in nextflow.

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