diff --git a/docs/make.jl b/docs/make.jl index a81f4d3..7327cfe 100644 --- a/docs/make.jl +++ b/docs/make.jl @@ -45,8 +45,7 @@ include(joinpath(@__DIR__(), "literate.jl")) "Noises" => [ "noises/noiseintro.md", "noises/homlin.md", - "noises/fBm.md", - "noises/colored.md" + "noises/fBm.md" ], "api.md", ], diff --git a/docs/src/examples/01-wiener_linearhomogeneous.md b/docs/src/examples/01-wiener_linearhomogeneous.md index 4fe5424..5bd2a60 100644 --- a/docs/src/examples/01-wiener_linearhomogeneous.md +++ b/docs/src/examples/01-wiener_linearhomogeneous.md @@ -1,5 +1,5 @@ ```@meta -EditURL = "https://github.com/rmsrosa/rode_conv_em/docs/literate/examples/01-wiener_linearhomogeneous.jl" +EditURL = "../../literate/examples/01-wiener_linearhomogeneous.jl" ``` # Homogenous linear RODE with a Wiener process noise coefficient diff --git a/docs/src/examples/02-wiener_linearnonhomogeneous.md b/docs/src/examples/02-wiener_linearnonhomogeneous.md index f9684af..2697dd6 100644 --- a/docs/src/examples/02-wiener_linearnonhomogeneous.md +++ b/docs/src/examples/02-wiener_linearnonhomogeneous.md @@ -1,5 +1,5 @@ ```@meta -EditURL = "https://github.com/rmsrosa/rode_conv_em/docs/literate/examples/02-wiener_linearnonhomogeneous.jl" +EditURL = "../../literate/examples/02-wiener_linearnonhomogeneous.jl" ``` # Non-homogenous linear RODE with a Wiener process noise coefficient diff --git a/docs/src/examples/03-sin_gBm_linearhomogeneous.md b/docs/src/examples/03-sin_gBm_linearhomogeneous.md index 7c4311c..0ce5516 100644 --- a/docs/src/examples/03-sin_gBm_linearhomogeneous.md +++ b/docs/src/examples/03-sin_gBm_linearhomogeneous.md @@ -1,5 +1,5 @@ ```@meta -EditURL = "https://github.com/rmsrosa/rode_conv_em/docs/literate/examples/03-sin_gBm_linearhomogeneous.jl" +EditURL = "../../literate/examples/03-sin_gBm_linearhomogeneous.jl" ``` # Homogenous linear RODE with the sine of a Geometric Brownian motion coefficient diff --git a/docs/src/examples/04-allnoises.md b/docs/src/examples/04-allnoises.md index 3f2af7e..1bbf36b 100644 --- a/docs/src/examples/04-allnoises.md +++ b/docs/src/examples/04-allnoises.md @@ -1,5 +1,5 @@ ```@meta -EditURL = "https://github.com/rmsrosa/rode_conv_em/docs/literate/examples/04-allnoises.jl" +EditURL = "../../literate/examples/04-allnoises.jl" ``` # Linear system with all implemented noises diff --git a/docs/src/examples/05-fBm_linear.md b/docs/src/examples/05-fBm_linear.md index b062348..6e8cd8c 100644 --- a/docs/src/examples/05-fBm_linear.md +++ b/docs/src/examples/05-fBm_linear.md @@ -1,5 +1,5 @@ ```@meta -EditURL = "https://github.com/rmsrosa/rode_conv_em/docs/literate/examples/05-fBm_linear.jl" +EditURL = "../../literate/examples/05-fBm_linear.jl" ``` # Linear RODE with fractional Brownian motion diff --git a/docs/src/examples/06-popdyn.md b/docs/src/examples/06-popdyn.md index 77aadd5..442a103 100644 --- a/docs/src/examples/06-popdyn.md +++ b/docs/src/examples/06-popdyn.md @@ -1,5 +1,5 @@ ```@meta -EditURL = "https://github.com/rmsrosa/rode_conv_em/docs/literate/examples/06-popdyn.jl" +EditURL = "../../literate/examples/06-popdyn.jl" ``` # Population dynamics with sin of gBm growth and step process harvest diff --git a/docs/src/examples/07-toggle_switch.md b/docs/src/examples/07-toggle_switch.md index 5d93895..2e01c46 100644 --- a/docs/src/examples/07-toggle_switch.md +++ b/docs/src/examples/07-toggle_switch.md @@ -1,5 +1,5 @@ ```@meta -EditURL = "https://github.com/rmsrosa/rode_conv_em/docs/literate/examples/07-toggle_switch.jl" +EditURL = "../../literate/examples/07-toggle_switch.jl" ``` # A toggle-switch model for gene expression diff --git a/docs/src/examples/08-earthquake.md b/docs/src/examples/08-earthquake.md index c980ad3..8132942 100644 --- a/docs/src/examples/08-earthquake.md +++ b/docs/src/examples/08-earthquake.md @@ -1,5 +1,5 @@ ```@meta -EditURL = "https://github.com/rmsrosa/rode_conv_em/docs/literate/examples/08-earthquake.jl" +EditURL = "../../literate/examples/08-earthquake.jl" ``` # Mechanical structural under random Earthquake-like seismic disturbances diff --git a/docs/src/examples/09-fisherkpp.md b/docs/src/examples/09-fisherkpp.md index 4e72466..a09eb3b 100644 --- a/docs/src/examples/09-fisherkpp.md +++ b/docs/src/examples/09-fisherkpp.md @@ -1,5 +1,5 @@ ```@meta -EditURL = "https://github.com/rmsrosa/rode_conv_em/docs/literate/examples/09-fisherkpp.jl" +EditURL = "../../literate/examples/09-fisherkpp.jl" ``` # Random Fisher-KPP partial differential equation diff --git a/docs/src/examples/10-risk.md b/docs/src/examples/10-risk.md index 20698b7..ac95553 100644 --- a/docs/src/examples/10-risk.md +++ b/docs/src/examples/10-risk.md @@ -1,5 +1,5 @@ ```@meta -EditURL = "https://github.com/rmsrosa/rode_conv_em/docs/literate/examples/10-risk.jl" +EditURL = "../../literate/examples/10-risk.jl" ``` # An actuarial risk model diff --git a/latex/img/allnoises_combined.png b/latex/img/allnoises_combined.png index c793a3a..24b9cbe 100644 Binary files a/latex/img/allnoises_combined.png and b/latex/img/allnoises_combined.png differ diff --git a/latex/img/approximation_linearhomogenous.png b/latex/img/approximation_linearhomogenous.png index d177a7e..2ba676f 100644 Binary files a/latex/img/approximation_linearhomogenous.png and b/latex/img/approximation_linearhomogenous.png differ diff --git a/latex/img/approximation_riskmodel.png b/latex/img/approximation_riskmodel.png index 97b4dcf..55e7b9d 100644 Binary files a/latex/img/approximation_riskmodel.png and b/latex/img/approximation_riskmodel.png differ diff --git a/latex/img/approximation_toggleswitch.png b/latex/img/approximation_toggleswitch.png index 2f954de..7c24a2a 100644 Binary files a/latex/img/approximation_toggleswitch.png and b/latex/img/approximation_toggleswitch.png differ diff --git a/latex/img/evolution_riskmodel.png b/latex/img/evolution_riskmodel.png index 661eb7d..e62f6cc 100644 Binary files a/latex/img/evolution_riskmodel.png and b/latex/img/evolution_riskmodel.png differ diff --git a/latex/img/evolution_toggleswitch.png b/latex/img/evolution_toggleswitch.png index f4e5d1e..ded3a73 100644 Binary files a/latex/img/evolution_toggleswitch.png and b/latex/img/evolution_toggleswitch.png differ diff --git a/latex/img/noise_earthquake.png b/latex/img/noise_earthquake.png index 44b8c7b..0e74ab2 100644 Binary files a/latex/img/noise_earthquake.png and b/latex/img/noise_earthquake.png differ diff --git a/latex/img/noisepath_allnoises.png b/latex/img/noisepath_allnoises.png index 38e42ee..4992b23 100644 Binary files a/latex/img/noisepath_allnoises.png and b/latex/img/noisepath_allnoises.png differ diff --git a/latex/img/order_fisherkpp.png b/latex/img/order_fisherkpp.png index e6953c4..182e952 100644 Binary files a/latex/img/order_fisherkpp.png and b/latex/img/order_fisherkpp.png differ diff --git a/latex/img/riskmodel_surplus.png b/latex/img/riskmodel_surplus.png index 3641731..6f4c91b 100644 Binary files a/latex/img/riskmodel_surplus.png and b/latex/img/riskmodel_surplus.png differ diff --git a/latex/img/sample_popdyn_gBmPoisson.png b/latex/img/sample_popdyn_gBmPoisson.png index 4f887ee..d1f413e 100644 Binary files a/latex/img/sample_popdyn_gBmPoisson.png and b/latex/img/sample_popdyn_gBmPoisson.png differ diff --git a/latex/img/toggleswitch_combined.png b/latex/img/toggleswitch_combined.png index 0cc61d1..2c43eb1 100644 Binary files a/latex/img/toggleswitch_combined.png and b/latex/img/toggleswitch_combined.png differ