Main repository for the practice based on the NGS Data Analysis lesson.
Protocols for this practice are available in the three notebooks in this repository. They can be accessed by directly clicking on them or using the launch binder button above.
- 01_Overview - setup instructions and introduction to the used tools
- 02_Galaxy - main data analysis using Galaxy
- 03_RStudio - variants functional annotation and visualization using RStudio Cloud
The only requirement for this practice is to have an account on Galaxy and on RStudio Cloud. Please sign up to these two services if you haven't done so yet.