diff --git a/NAMESPACE b/NAMESPACE index 0364778..8d3232b 100644 --- a/NAMESPACE +++ b/NAMESPACE @@ -1,6 +1,7 @@ # Generated by roxygen2: do not edit by hand export("%>%") +export(.XenaHub) export(XenaBrowse) export(XenaDataUpdate) export(XenaDownload) diff --git a/man/XenaHub.Rd b/man/XenaHub.Rd index aa97fa4..a31d3c5 100644 --- a/man/XenaHub.Rd +++ b/man/XenaHub.Rd @@ -8,9 +8,8 @@ XenaHub( hosts = xena_default_hosts(), cohorts = character(), datasets = character(), - hostName = c("publicHub", "tcgaHub", "gdcHub", "icgcHub", "toilHub", - "pancanAtlasHub", "treehouseHub", "pcawgHub", "atacseqHub", "singlecellHub", - "kidsfirstHub") + hostName = c("publicHub", "tcgaHub", "gdcHub", "icgcHub", "toilHub", "pancanAtlasHub", + "treehouseHub", "pcawgHub", "atacseqHub", "singlecellHub", "kidsfirstHub") ) } \arguments{ diff --git a/man/fetch.Rd b/man/fetch.Rd index 94e09ac..97b062e 100644 --- a/man/fetch.Rd +++ b/man/fetch.Rd @@ -80,17 +80,17 @@ used to map a gene location to a set of probes. } \section{Functions}{ \itemize{ -\item \code{fetch_dense_values}: fetches values from a dense matrix. +\item \code{fetch_dense_values()}: fetches values from a dense matrix. -\item \code{fetch_sparse_values}: fetches values from a sparse \code{data.frame}. +\item \code{fetch_sparse_values()}: fetches values from a sparse \code{data.frame}. -\item \code{fetch_dataset_samples}: fetches samples from a dataset +\item \code{fetch_dataset_samples()}: fetches samples from a dataset -\item \code{fetch_dataset_identifiers}: fetches identifies from a dataset. +\item \code{fetch_dataset_identifiers()}: fetches identifies from a dataset. -\item \code{has_probeMap}: checks if a dataset has ProbeMap. -}} +\item \code{has_probeMap()}: checks if a dataset has ProbeMap. +}} \examples{ library(UCSCXenaTools)