setup.py

# -*- coding: utf-8 -*-
#_____________________________________________________________________________
#
# Copyright (c) 2012 Berlin Institute of Technology
# All rights reserved.
#
# Developed by:	Philipp Meier <pmeier82@gmail.com>
#               Neural Information Processing Group (NI)
#               School for Electrical Engineering and Computer Science
#               Berlin Institute of Technology
#               MAR 5-6, Marchstr. 23, 10587 Berlin, Germany
#               http://www.ni.tu-berlin.de/
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to
# deal with the Software without restriction, including without limitation the
# rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
# sell copies of the Software, and to permit persons to whom the Software is
# furnished to do so, subject to the following conditions:
#
# * Redistributions of source code must retain the above copyright notice,
#   this list of conditions and the following disclaimers.
# * Redistributions in binary form must reproduce the above copyright notice,
#   this list of conditions and the following disclaimers in the documentation
#   and/or other materials provided with the distribution.
# * Neither the names of Neural Information Processing Group (NI), Berlin
#   Institute of Technology, nor the names of its contributors may be used to
#   endorse or promote products derived from this Software without specific
#   prior written permission.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
# FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
# WITH THE SOFTWARE.
#_____________________________________________________________________________
#
# Acknowledgements:
#   Philipp Meier <pmeier82@gmail.com>
#_____________________________________________________________________________
#

__docformat__ = 'restructuredtext'

##---IMPORTS

# setup tools and cython
from setuptools import setup, find_packages
# Warning : do not import the distutils extension before setuptools
# It does break the cythonize function calls
from distutils.extension import Extension

try:
    from Cython.Distutils import build_ext
except ImportError:
    build_ext = None

# other imports
import numpy

##--HELPERS

def find_version():
    """read version from botmpy.__init__"""

    try:
        f = open('./botmpy/__init__.py', 'r')
        try:
            for line in f:
                if line.startswith('__version__'):
                    rval = line.split()[-1][1:-1]
                    break
        finally:
            f.close()
    except:
        rval = '0'
    return rval

##---CYTHON

ext_mod_list = []
if build_ext is not None:
    ext_mod_list.append(
        Extension(
            'botmpy.common.mcfilter.mcfilter_cy',
            ['botmpy/common/mcfilter/mcfilter_cy.pyx'],
            include_dirs=[numpy.get_include()]))

##---MAIN

if __name__ == '__main__':
    setup(
        #main
        name='BOTMpy',
        version=find_version(),
        packages=['botmpy',
                  'botmpy.common',
                  'botmpy.common.datafile',
                  'botmpy.common.mcfilter',
                  'botmpy.nodes'],
        requires=['numpy', 'scipy', 'mdp', 'sklearn'],
        zip_safe=False,

        # metadata
        author='Philipp Meier',
        author_email='pmeier82@gmail.com',
        maintainer='Philipp Meier',
        maintainer_email='pmeier82@gmail.com',
        description=open('README', 'r').readline().strip(),
        long_description=open('README', 'r').read(),
        license='University of Illinois/NCSA Open Source License',
        url='http://www.ni.tu-berlin.de',
        classifiers=[
            'Development Status :: 4 - Beta',
            'Intended Audience :: Science/Research',
            'License :: OSI Approved :: University of Illinois/NCSA Open Source License',
            'Natural Language :: English',
            'Operating System :: OS Independent',
            'Programming Language :: Python',
            'Programming Language :: Cython',
            'Topic :: Scientific/Engineering :: Bio-Informatics',
            'Topic :: Scientific/Engineering :: Information Analysis'],

        # cython
        cmdclass={'build_ext': build_ext},
        ext_modules=ext_mod_list)