This repository is to reanalyse Antell et al. (2021) data, mostly foraminiferal optimal temperature. The reanalysed data is used to demonstrates that foraminifera optimal temperature is changing throughout glacial-interglaical cycle, and such changing is weakly but significanlty correlated to temperature change.
- Publication: Ying, R., Monteiro, F. M., Wilson, J. D., Ödalen, M. & Schmidt, D. N. Past foraminiferal acclimatization capacity is limited during future warming. Nature (2024). https://doi.org/10.1038/s41586-024-08029-0
Gawain S. Antell, Isabel S. Fenton, Paul J. Valdes, and Erin E. Saupe (2021). “Thermal niches of planktonic foraminifera are static throughout glacial–interglacial climate change.” Proceedings of the National Academy of Sciences, 118 (DOI:10.1073/pnas.2017105118).
Github repo: https://github.com/GawainAntell/ForamNiches.
- We plot optimal temperature to show the ecology change, instead of focusing on the overall niche similarity
- We use the habitat temperature change instead of global mean temperature in asessing climatic effects.
tree -L 2 .. ├── LICENSE ├── code │ ├── BRIDGE_GCM_data_prep.R (original script to get HadCM3L data) │ ├── Plot_renalysed_data.R (used to plot Fig.3) │ ├── Reanalyse_data.R (used to reanalyse data) │ ├── LGM_subset.R (used to plot Fig.S9) │ └── raster_brick_import_fcn.R (code used in `BRIGE_GCM_data_prep.R`) ├── data │ ├── RY_realaysis.RDS │ ├── Rebotim2017.csv │ ├── foram_sp_db.csv │ ├── gcm_annual_mean │ ├── gcm_model_codes.csv │ ├── global-MAT_10-deg-grid_8ka.csv │ ├── global-MAT_10-deg-grid_8ka_hl.csv │ ├── global-MAT_10-deg-grid_8ka_ll.csv │ ├── global-MAT_10-deg-grid_8ka_ml.csv │ └── niche-sumry-metrics_SJ-ste_hab_2020-11-15.csv ├── output │ ├── fig3.jpg │ ├── figs8.png │ └── figs9.png ├── quanternary_foram_niche.Rproj └── readme.org 5 directories, 20 files
This project is under the license of GPLv3 as the original repo.