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MetaProViz::ORA() - Create Helper function for Fishers Exact test. #77

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ChristinaSchmidt1 opened this issue Jan 30, 2024 · 0 comments
Open

MetaProViz::ORA() - Create Helper function for Fishers Exact test. #77

ChristinaSchmidt1 opened this issue Jan 30, 2024 · 0 comments
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enhancement New feature or request Future Implementation will be done once priority issues are closed

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ChristinaSchmidt1 commented Jan 30, 2024 •
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Get rid of the dependency to ClusterProfiler to perform the fishers exact test (= Overrepresentation analysis). It is included in two functions: ClusterORA and StandardORA, both located in OverRepresentationAnalysis.R

Potentially make ahelper function to perform fishers exact test based on base R on the "different groups versus background".

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@ChristinaSchmidt1 ChristinaSchmidt1 added enhancement New feature or request Future Implementation will be done once priority issues are closed labels Jan 30, 2024
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