invalid path 'vignettes/MOFA_to_COSMOS_files/figure-gfm/Plot: Ligand-receptor activity estimates-1.png'

The process 'C:\Program Files\Git\bin\git.exe' failed with exit code 128

Process completed with exit code 1.

The path for one of the files in artifact is not valid: /cosmosR.Rcheck/00_pkg_src/cosmosR/vignettes/MOFA_to_COSMOS_files/figure-gfm/Plot: Ligand-receptor activity estimates-1.png. Contains the following character: Colon : Invalid characters include: Double quote ", Colon :, Less than <, Greater than >, Vertical bar |, Asterisk *, Question mark ?, Carriage return \r, Line feed \n The following characters are not allowed in files that are uploaded due to limitations with certain file systems such as NTFS. To maintain file system agnostic behavior, these characters are intentionally not allowed to prevent potential problems with downloads on different file systems.

The path for one of the files in artifact is not valid: /cosmosR.Rcheck/00_pkg_src/cosmosR/vignettes/MOFA_to_COSMOS_files/figure-gfm/Plot: Ligand-receptor activity estimates-1.png. Contains the following character: Colon : Invalid characters include: Double quote ", Colon :, Less than <, Greater than >, Vertical bar |, Asterisk *, Question mark ?, Carriage return \r, Line feed \n The following characters are not allowed in files that are uploaded due to limitations with certain file systems such as NTFS. To maintain file system agnostic behavior, these characters are intentionally not allowed to prevent potential problems with downloads on different file systems.

No such keg: /opt/homebrew/Cellar/r

Found the following files with non-portable file names:

R CMD check found ERRORs

Process completed with exit code 1.

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

No files were found with the provided path: check. No artifacts will be uploaded.

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config

HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!

harfbuzz 8.4.0 is already installed and up-to-date. To reinstall 8.4.0, run: brew reinstall harfbuzz