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46 expand tests #47

Merged
merged 42 commits into from
Aug 8, 2024
Merged

46 expand tests #47

merged 42 commits into from
Aug 8, 2024

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vicpaton
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@vicpaton vicpaton commented Aug 8, 2024

  • added sets of tests for modules data.omics, data.network, methods, eval.
  • Redid some ifelse statements to capture errors (some of them were not having else statements, only if and elif.

closes #46

vicpaton added 30 commits August 5, 2024 15:58
@vicpaton
updated vignette with new panacea loaders
4959994
@vicpaton
fixed bug
bd88b77
@vicpaton
removed moon reg function
7686798
@vicpaton
renamed import
40bc78d
@vicpaton
removed support for undirected graphs
44115aa
@vicpaton
disabled lazy import
802d8c1
@vicpaton
removed superfluous import
1c1d69b
@vicpaton
added EOL spacing
021d75e
@vicpaton
expanded tests for moon
ea3be70
@vicpaton
added tests for omics utils
52f019f
@vicpaton
added tests for prior knowledge
27271ec
@vicpaton
added tests
cffc045
@vicpaton
removed unused import
3505620
@vicpaton
added tests
c524633
@vicpaton
added reset index
d9fbc71
@vicpaton
fixed bug
d57d06a
@vicpaton
added tests for cptac_datasets
18815c6
@vicpaton
removed type_checking since it was preventing successful import
fc0fd31
@vicpaton
remove rounding
a98cfba
@vicpaton
expanded tests for deseq2
b8bb253
@vicpaton
removed descryptm raw-file dowload (not in nc anyways)
47683e5
@vicpaton
added tests
0e540c3
@vicpaton
added tests
db69387
@vicpaton
renamed nci60 data
068e82f
@vicpaton
added tests for panacea
a32c712
@vicpaton
added fast tests for scperturb
fc81761
@vicpaton
removed support for undirected graphs
87d239e
@vicpaton
linted code
e46c33b
@vicpaton
added tests for metrics
f810485
@vicpaton
redid try/except chunk
c8a2801
@vicpaton vicpaton self-assigned this Aug 8, 2024
@vicpaton vicpaton merged commit a00fbd4 into dev Aug 8, 2024
8 checks passed
@vicpaton vicpaton deleted the 46-expand-tests branch August 8, 2024 16:16
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