Code

46 expand tests#47

Code

Merged

vicpaton merged 42 commits intodevsaezlab/networkcommons:devfrom 46-expand-testssaezlab/networkcommons:46-expand-testsCopy head branch name to clipboardAug 8, 2024

+2,074-440

Commits

Commits on Aug 5, 2024

• updated vignette with new panacea loaders

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  4959994

• fixed bug

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  bd88b77

• removed moon reg function

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  7686798

Commits on Aug 6, 2024

• renamed import

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  40bc78d

• removed support for undirected graphs

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  44115aa

• disabled lazy import

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  802d8c1

• removed superfluous import

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  1c1d69b

• added EOL spacing

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  021d75e

• expanded tests for moon

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  ea3be70

• added tests for omics utils

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  52f019f

• added tests for prior knowledge

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  27271ec

• added tests

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  cffc045

• removed unused import

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  3505620

• added tests

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  c524633

• added reset index

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  d9fbc71

• fixed bug

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  d57d06a

• added tests for cptac_datasets

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  18815c6

• removed type_checking since it was preventing successful import

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  fc0fd31

• remove rounding

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  a98cfba

• expanded tests for deseq2

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  b8bb253

• removed descryptm raw-file dowload (not in nc anyways)

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  47683e5

• added tests

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  0e540c3

• added tests

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  db69387

• renamed nci60 data

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  068e82f

• added tests for panacea

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  a32c712

• added fast tests for scperturb

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  fc81761

Commits on Aug 7, 2024

• removed support for undirected graphs

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  87d239e

• linted code

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  e46c33b

• added tests for metrics

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  f810485

Commits on Aug 8, 2024

• redid try/except chunk

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  c8a2801

• added tests

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  ea01ea6

• added error capture for invalid types

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  b28da56

• reformulated ifelse chunk

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  822222b

• added tests for error capturing

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  ad80399

• captured error and added log

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  a84b052

• added tests

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  f5b7236

• removed build_moon_regulons

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  0400567

• removed unused function

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  3377bf1

• added tests for _commons module

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  0fafc07

• removed multigraph support from networkx

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  c0d392b

• redid ifelse statement for graph check

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  ca3310b

• added tests

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  c175674