Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Warning: Layer counts isn't present in the assay object; returning NULL #194

Open
Noralii opened this issue May 23, 2024 · 0 comments
Open

Warning: Layer counts isn't present in the assay object; returning NULL #194

Noralii opened this issue May 23, 2024 · 0 comments

Comments

@Noralii
Copy link

Noralii commented May 23, 2024

data_combined %<>% RunPCA(object = ., features = VariableFeatures(object = .)) %>% #nolint
RunFastMNN(object = ., object.list = SplitObject(., split.by = "sampleid"))
Computing 2000 integration features
Warning: Layer counts isn't present in the assay object; returning NULL
Warning: Layer counts isn't present in the assay object; returning NULL
Warning: Layer counts isn't present in the assay object; returning NULL
Warning: Layer counts isn't present in the assay object; returning NULL
Warning: Layer counts isn't present in the assay object; returning NULL
Warning: Layer counts isn't present in the assay object; returning NULL
Warning: Layer counts isn't present in the assay object; returning NULL
Warning: Layer counts isn't present in the assay object; returning NULL
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@Noralii