_config.yml

# Book settings
# Learn more at https://jupyterbook.org/customize/config.html

title: Example paper
author: Henrik Finsberg and Jørgen Dokken
logo: "docs/logo.png"
copyright: "2023"
only_build_toc_files: true

# Force re-execution of notebooks on each build.
# See https://jupyterbook.org/content/execute.html
execute:
  execute_notebooks: cache

# Information about where the book exists on the web
repository:
  url: https://github.com/scientificcomputing/example-paper # Online location of your book
  branch: main  # Which branch of the repository should be used when creating links (optional)

launch_buttons:
  notebook_interface: "jupyterlab" # The interface interactive links will activate ["classic", "jupyterlab"]
  binderhub_url: "https://mybinder.org"

html:
  use_issues_button: true
  use_repository_button: true

parse:
  myst_enable_extensions:
    - amsmath
    - dollarmath
    - linkify


sphinx:
  config:
    bibtex_bibfiles: ["docs/refs.bib"]
    nb_execution_show_tb: True
    html_theme_options:
      navigation_with_keys: false
    html_last_updated_fmt: "%b %d, %Y"
    nb_custom_formats:  # https://jupyterbook.org/en/stable/file-types/jupytext.html#file-types-custom
        .py:
            - jupytext.reads
            - fmt: py

  extra_extensions:
  - 'sphinx.ext.autodoc'
  - 'sphinx.ext.napoleon'
  - 'sphinx.ext.viewcode'
  - "sphinxcontrib.bibtex"


exclude_patterns: [".pytest_cache/*", ".github/*"]