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scifio-itk-bridge

NB: This scifio-itk-bridge provides the Java side of SCIFIO-ITK integration. For the C++ side, see scifio-imageio.

Provides a simple bridge class that can be called by an ITK ImageIO (C++) to pipe information to and from SCIFIO-based Readers and Writers (Java).

Instructions for use: This project should be automatically downloaded by ITK. However, the SCIFIOImageIO is not enabled by default in ITK. To ensure its use, set the ITK_AUTOLOAD_PATH environment variable to point to the itkSCIFIOImageIO after it's built.

NB: This is not an ITK-specific solution, and nothing in the Java code mandates the use of ITK. But as this solution uses pipes to communicate between C++ and Java, care must be taken in the formatting of this application's input and reading of the output. See also the scifio-imageio project, which implements the itkSCIFIOImageIO consuming the data produced by the SCIFIOITKBridge.

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Java code which pipes information between SCIFIO and ITK.

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