Docker container fix

docker/Dockerfile → Dockerfile

@@ -4,54 +4,34 @@ FROM ubuntu:20.04
 ARG DEBIAN_FRONTEND=noninteractive
 RUN apt-get update -qq && \
     apt-get -y --no-install-recommends install \
-    build-essential \
-    software-properties-common \
-    wget \
-    python3 \
-    python3-dev \
-    python \
-    libpython3.8-dev \
-    python3-pip \
-    python3-numpy \
-    python3-six \
-    python3-scipy \
-    python3-astropy \
-    python3-setuptools \
-    gfortran \
-    libglib2.0-dev \
-    libpng-dev \
-    bc \
-    curl \
     autoconf \
-    autotools-dev \
     automake \
-    autogen \
-    libtool \
-    pkg-config \
-    cmake \
-    csh \
+    build-essential \
+    gfortran \
     git \
-    cvs \
+    latex2html \
+    libcfitsio-bin \
     libcfitsio-dev \
-    pgplot5 \
-    hwloc \
-    python-dev \
-    libfftw3-3 \
     libfftw3-bin \
     libfftw3-dev \
-    libfftw3-single3 \
+    libglib2.0-dev \
+    libpng-dev \
+    libtool \
     libx11-dev \
-    libpnglite-dev \
-    libhdf5-dev \
-    libhdf5-serial-dev \
-    libxml2 \
-    libxml2-dev \
-    libltdl-dev \
-    gsl-bin \
-    libgsl-dev && \
+    pgplot5 \
+    python3-dev \
+    python3-numpy \
+    python3-pip \
+    tcsh \
+    wget && \
     apt-get clean all && \
     rm -r /var/lib/apt/lists/*
 
+# Add pgplot environment variables
+ENV PGPLOT_DIR=/usr/local/pgplot
+ENV PGPLOT_DEV=/Xserve
+
+# Install python dependancies
 RUN pip3 install numpy \
     scipy \
     astropy
@@ -81,6 +61,7 @@ RUN wget https://www.atnf.csiro.au/research/pulsar/psrcat/downloads/psrcat_pkg.t
     ls && \
     bash makeit && \
     cp psrcat /usr/bin
+ENV PSRCAT_FILE /home/soft/psrcat_tar/psrcat.db
 
 # Install tempo
 RUN git clone https://github.com/nanograv/tempo.git && \
@@ -90,30 +71,7 @@ RUN git clone https://github.com/nanograv/tempo.git && \
     make && \
     make install
 ENV TEMPO /home/soft/tempo
-
-# Install tempo2
-WORKDIR /home/soft/tempo2
-ENV TEMPO2 /home/soft/tempo2
-RUN wget https://sourceforge.net/projects/tempo2/files/latest/download && \
-    tar -xzvf download && \
-    rm download && \
-    cp -r tempo2*/T2runtime/ $TEMPO2
-
-# Install pgplot
-WORKDIR /usr/local/src
-RUN wget ftp://ftp.astro.caltech.edu/pub/pgplot/pgplot5.2.tar.gz && \
-    tar zxvf pgplot5.2.tar.gz && \
-    rm pgplot5.2.tar.gz
-WORKDIR /usr/local/pgplot
-ADD docker/drivers.list /usr/local/pgplot
-RUN /usr/local/src/pgplot/makemake /usr/local/src/pgplot linux g77_gcc_aout && \
-    sed -i 's/FCOMPL=g77/FCOMPL=gfortran/' makefile && \
-    make && \
-    make cpg && \
-    make clean
-ENV PGPLOT_DIR=/usr/local/pgplot
-ENV PGPLOT_DEV=/Xserve
-
+
 # Install presto
 WORKDIR /code/presto/src
 RUN make makewisdom && \