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SraRunTable.txt
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SraRunTable.txt
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AvgSpotLen BioSample Experiment MBases MBytes Run SRA_Sample Sample_Name biological_replicate infection time_point Assay_Type BioProject Center_Name Consent DATASTORE_filetype DATASTORE_provider InsertSize Instrument LibraryLayout LibrarySelection LibrarySource LoadDate Organism Platform ReleaseDate SRA_Study source_name strain tissue
252 SAMN06887647 SRX2782237 5512 2084 SRR5506411 SRS2164437 GSM2598257 2 A/Wyoming/03/03 (H3N2) 02d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887646 SRX2782238 20396 7680 SRR5506412 SRS2164438 GSM2598258 3 A/Wyoming/03/03 (H3N2) 02d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887620 SRX2782239 10620 3481 SRR5506389 SRS2164439 GSM2598235 1 A/California/04/09 (H1N1) 12h RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887619 SRX2782240 9289 3121 SRR5506390 SRS2164440 GSM2598236 2 A/California/04/09 (H1N1) 12h RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887618 SRX2782241 9835 3290 SRR5506391 SRS2164441 GSM2598237 3 A/California/04/09 (H1N1) 12h RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887665 SRX2782242 3329 1018 SRR5506392 SRS2164442 GSM2598238 1 A/Wyoming/03/03 (H3N2) 12h RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887664 SRX2782243 3488 1064 SRR5506393 SRS2164443 GSM2598239 2 A/Wyoming/03/03 (H3N2) 12h RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887663 SRX2782244 3308 1005 SRR5506394 SRS2164444 GSM2598240 3 A/Wyoming/03/03 (H3N2) 12h RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887662 SRX2782245 13914 4675 SRR5506395 SRS2164445 GSM2598241 1 A/Vietnam/1203/04 (H5N1) HALo 12h RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887661 SRX2782246 13014 4362 SRR5506396 SRS2164446 GSM2598242 2 A/Vietnam/1203/04 (H5N1) HALo 12h RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887660 SRX2782247 15342 5191 SRR5506397 SRS2164447 GSM2598243 3 A/Vietnam/1203/04 (H5N1) HALo 12h RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887659 SRX2782248 10685 3664 SRR5506398 SRS2164448 GSM2598244 1 A/California/04/09 (H1N1) 01d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887656 SRX2782249 11360 3928 SRR5506399 SRS2164449 GSM2598245 2 A/California/04/09 (H1N1) 01d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887621 SRX2782250 11032 3630 SRR5506400 SRS2164450 GSM2598246 3 A/California/04/09 (H1N1) 01d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887655 SRX2782251 4273 1421 SRR5506401 SRS2164451 GSM2598247 1 A/Wyoming/03/03 (H3N2) 01d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887654 SRX2782252 6929 2241 SRR5506402 SRS2164452 GSM2598248 2 A/Wyoming/03/03 (H3N2) 01d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887653 SRX2782253 2423 783 SRR5506403 SRS2164453 GSM2598249 3 A/Wyoming/03/03 (H3N2) 01d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887652 SRX2782254 11409 3746 SRR5506404 SRS2164454 GSM2598250 1 A/Vietnam/1203/04 (H5N1) HALo 01d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887657 SRX2782255 7403 2788 SRR5506405 SRS2164455 GSM2598251 2 A/Vietnam/1203/04 (H5N1) HALo 01d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887658 SRX2782256 20081 6722 SRR5506406 SRS2164456 GSM2598252 3 A/Vietnam/1203/04 (H5N1) HALo 01d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887650 SRX2782258 10861 4129 SRR5506408 SRS2164457 GSM2598254 2 A/California/04/09 (H1N1) 02d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887651 SRX2782257 10559 3705 SRR5506407 SRS2164458 GSM2598253 1 A/California/04/09 (H1N1) 02d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887649 SRX2782259 9227 3474 SRR5506409 SRS2164459 GSM2598255 3 A/California/04/09 (H1N1) 02d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887648 SRX2782260 11999 4504 SRR5506410 SRS2164460 GSM2598256 1 A/Wyoming/03/03 (H3N2) 02d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887645 SRX2782261 12514 4558 SRR5506413 SRS2164461 GSM2598259 1 A/Vietnam/1203/04 (H5N1) HALo 02d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887644 SRX2782262 11861 5151 SRR5506414 SRS2164462 GSM2598260 2 A/Vietnam/1203/04 (H5N1) HALo 02d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
250 SAMN06887643 SRX2782263 10760 3922 SRR5506415 SRS2164463 GSM2598261 3 A/Vietnam/1203/04 (H5N1) HALo 02d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
251 SAMN06887642 SRX2782264 6559 2633 SRR5506416 SRS2164464 GSM2598262 1 A/California/04/09 (H1N1) 03d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
251 SAMN06887641 SRX2782265 9595 3933 SRR5506417 SRS2164465 GSM2598263 2 A/California/04/09 (H1N1) 03d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887639 SRX2782267 6280 2704 SRR5506419 SRS2164466 GSM2598265 1 A/Wyoming/03/03 (H3N2) 03d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887640 SRX2782266 22575 9720 SRR5506418 SRS2164467 GSM2598264 3 A/California/04/09 (H1N1) 03d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887638 SRX2782268 2612 1128 SRR5506420 SRS2164468 GSM2598266 2 A/Wyoming/03/03 (H3N2) 03d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887637 SRX2782269 13122 4626 SRR5506421 SRS2164469 GSM2598267 3 A/Wyoming/03/03 (H3N2) 03d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887636 SRX2782270 7232 2573 SRR5506422 SRS2164470 GSM2598268 1 A/Vietnam/1203/04 (H5N1) HALo 03d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887635 SRX2782271 9059 3224 SRR5506423 SRS2164471 GSM2598269 2 A/Vietnam/1203/04 (H5N1) HALo 03d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887634 SRX2782272 9347 3311 SRR5506424 SRS2164472 GSM2598270 3 A/Vietnam/1203/04 (H5N1) HALo 03d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887633 SRX2782273 13819 4848 SRR5506425 SRS2164473 GSM2598271 1 A/California/04/09 (H1N1) 04d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887632 SRX2782274 11948 4192 SRR5506426 SRS2164474 GSM2598272 2 A/California/04/09 (H1N1) 04d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887631 SRX2782275 6962 2439 SRR5506427 SRS2164475 GSM2598273 3 A/California/04/09 (H1N1) 04d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887630 SRX2782276 4593 1626 SRR5506428 SRS2164476 GSM2598274 1 A/Wyoming/03/03 (H3N2) 04d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887629 SRX2782277 6246 2471 SRR5506429 SRS2164477 GSM2598275 2 A/Wyoming/03/03 (H3N2) 04d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887628 SRX2782278 25124 10107 SRR5506430 SRS2164478 GSM2598276 3 A/Wyoming/03/03 (H3N2) 04d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887626 SRX2782280 15201 6047 SRR5506432 SRS2164479 GSM2598278 2 A/Vietnam/1203/04 (H5N1) HALo 04d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887627 SRX2782279 20287 8059 SRR5506431 SRS2164480 GSM2598277 1 A/Vietnam/1203/04 (H5N1) HALo 04d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887625 SRX2782281 18417 7375 SRR5506433 SRS2164481 GSM2598279 3 A/Vietnam/1203/04 (H5N1) HALo 04d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887624 SRX2782282 24500 9593 SRR5506434 SRS2164482 GSM2598280 1 uninfected (mock control) 04d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887622 SRX2782284 8582 3377 SRR5506436 SRS2164483 GSM2598282 3 uninfected (mock control) 04d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung
252 SAMN06887623 SRX2782283 8066 3134 SRR5506435 SRS2164484 GSM2598281 2 uninfected (mock control) 04d RNA-Seq PRJNA385346 GEO public sra ncbi 0 Illumina HiSeq 2500 PAIRED cDNA TRANSCRIPTOMIC 2017-05-03 Mus musculus ILLUMINA 2017-05-05 SRP106381 Mouse Lung Tissue C57BL/6 Lung